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Report for CCDS22664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22664.1 Public Mus musculus 8 Mtss2 23 108 98 CCDS HistoryNCBI Gene:244654Re-query CCDS DB by CCDS ID:22664.1Re-query CCDS DB by GeneID:244654See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22664.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052457.14 ENSMUSP00000050211.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052457.14Link to Ensembl Protein Viewer:ENSMUSP00000050211.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000052457Re-query CCDS DB by Protein ID:ENSMUSP00000050211
Original member NCBI NM_198625.2 NP_941027.1 Updated not alive Link to Nucleotide Sequence:NM_198625.2Link to Protein Sequence:NP_941027.1Re-query CCDS DB by Nucleotide ID:NM_198625Re-query CCDS DB by Protein ID:NP_941027
Current member NCBI NM_198625.3 NP_941027.1 Accepted alive Link to Nucleotide Sequence:NM_198625.3Link to Protein Sequence:NP_941027.1Re-query CCDS DB by Nucleotide ID:NM_198625Re-query CCDS DB by Protein ID:NP_941027Link to BLAST:NP_941027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941027.1 715 Q6P9S0 715 100% 0 0

Chromosomal Locations for CCDS 22664.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110721722 110721790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110726194 110726255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110726375 110726448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110727113 110727197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110727304 110727395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110727477 110727551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110728728 110728885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110729170 110729277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110730023 110730120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110732058 110732178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110737146 110737220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110737572 110737748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110737930 110738095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110738290 110739077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2148 nt):
ATGGAGACGGCGGAGAAGGAGTGTGGCGCCTTGGGCGGGCTCTTCCAGGCCATCGTCAACGACATGAAGA
GCTCCTACCCCATCTGGGAGGACTTCAACTCCAAGGCTGCGAAGCTCCACTCTCAGCTGAGGACCACTGT
GCTGGCTGCTGTGGCCTTCCTCGATGCCTTCCAGAAAGTAGCTGACATGGCCACCAACACCAGAGGGGCC
ACGCGGGACATTGGCTCAGCGCTCACGCGCATGTGCATGCGCCACCGCAGCATCGAGACCAAGCTGCGGC
AGTTCACCAACGCGCTGCTGGAGAGCCTCATCAATCCACTGCAGGAGCGCATCGAAGACTGGAAGAAGTC
AGCCAACCAACTGGACAAGGACCATGCGAAAGAGTATAAACGAGCCAGGCATGAAATCAAAAAGAAGTCA
TCCGACACGCTGAAGCTACAGAAGAAAGCACGCAAAGGGAAAGGAGACCTGCAGCCCCAGCTGGACAGTG
CCCTTCAAGACGTCAACGACATGTACTTGCTACTGGAAGAGACGGAGAAGCAGGCTGTGCGCCGTGCGCT
GATTGAGGAGCGGGGCCGTTTCTGCACCTTTATCACCTTCCTCCAGCCGGTGGTGAACGGCGAGCTGACC
ATGCTGGGAGAGATCACTCACCTGCAGGGCATCATTGACGACCTGGTAGTGCTGACTGCAGATCCCCACA
AACTGCCTCCCGCCAGTGAGCAGGTGATCAAAGACCTGAAGGGTTCTGACTATAGCTGGTCGTACCAGAC
CCCACCCTCGTCACCCAGCAGCTCCAACTCCCGGAAGTCCAGCATGTGCAGCCTGGCACAGCCGGCCACC
ACCCGCCTCTCCAGTGTCTCCTCCCACGACTCTGGCTTCGTCTCCCAGGACCCCACCTACTCCAAGCCCC
CTTCGCCCATGCCTTCCGACATCACCAGCCAGAAATCCTCCAGCTCTGCGTCCTCCGAGGCCTCAGAAAC
CTGTCAGTCAGTTAGCGAGTGCAGCTCCCCAACCTCGGACTGGACCAAGGCTGGTCCCCACGAACAACCC
TCAGCCACCACCCTGCAGCGGAGGAAGGATCGTGTGGAACACCTCCGAGACACTGAGCCAGGCCCTACTG
GTGGAGGCACTGTGGGCTCCAGTGGAGAGGAGGTGCCACGAACCCGGATGTCTCCTGCCACCATAGCAGC
CAAACATGGTGAGGAGGTATCCCCTGCTGCCAGCGACCTAGCCATGGTGCTGACCCGCGGACTGAGCCTG
GAACACCAGAAGAGCAGCCGAGACTCGCTGCAGTATTCCAGTGGCTACAGCACACAGACCACCACACCTT
CCTGCTCCGAGGACACCATCCCCTCCCAAGGCTCAGACTACGACTGCTACTCTGTGAATGGGGATGCAGA
CAGTGAAGGCCCCCCTGAGTTCGACAAATCATCTACCATTCCTCGAAACAGCAACATAGCCCAGAACTAC
CGCCGCCTGATCCAGACCAAGCGCCCAGCCTCCACCGCCGGGCTGCCCACGGCAGGGCTGCCCACAGCCA
TGGGGCTGCCCTCCGGTGCACCTCCCGGTGTGGCCACCATCCGCCGCACACCCTCTACCAAGCCCACTGT
GCGCCGCGCCCTCTCCAGCGCTGGCCCCATCCCCATCCGCCCACCCATCGTCCCTGTGAAGACACCCACC
GTGCCCGACTCCCCTGGCTATGTGGGGCCCACACGGGCAGGCAGTGAGGAGTGCGTCTTCTACACAGACG
AAGTGGCCTCACCTTTGGCTCCAGACCTGGCCAAAGCCTCCCCAAAGAGGCTCAGCCTGCCTAACACAGC
CTGGGGCAGCCAGTCCCCAGAGGTAGCTAGCTACGGCGGCGGGGCTGCGGTCGGGCTGGCCACCGAGGAC
GAAGAGCAGCAACTGGCTGCCAACAGGCACAGCCTAGTAGAGAAGCTTGGGGAGCTGGTGGCCGGTGCCC
ACGCCCTGGGTGAGGGCCAGTTCCCCTTCCCTACCGCCCTGTCAGCCACTCCTTCGGAGGAAACGCCCAC
TCCACCCCCTGCTGCCACCAGTGACCCCCCGGCCGAAGACATGCTGGTGGCCATTCGTCGCGGGGTCCGG
CTGCGCAGGACCGTCACCAACGACAGGTCGGCGCCCCGCATCTTATGA

Translation (715 aa):
METAEKECGALGGLFQAIVNDMKSSYPIWEDFNSKAAKLHSQLRTTVLAAVAFLDAFQKVADMATNTRGA
TRDIGSALTRMCMRHRSIETKLRQFTNALLESLINPLQERIEDWKKSANQLDKDHAKEYKRARHEIKKKS
SDTLKLQKKARKGKGDLQPQLDSALQDVNDMYLLLEETEKQAVRRALIEERGRFCTFITFLQPVVNGELT
MLGEITHLQGIIDDLVVLTADPHKLPPASEQVIKDLKGSDYSWSYQTPPSSPSSSNSRKSSMCSLAQPAT
TRLSSVSSHDSGFVSQDPTYSKPPSPMPSDITSQKSSSSASSEASETCQSVSECSSPTSDWTKAGPHEQP
SATTLQRRKDRVEHLRDTEPGPTGGGTVGSSGEEVPRTRMSPATIAAKHGEEVSPAASDLAMVLTRGLSL
EHQKSSRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADSEGPPEFDKSSTIPRNSNIAQNY
RRLIQTKRPASTAGLPTAGLPTAMGLPSGAPPGVATIRRTPSTKPTVRRALSSAGPIPIRPPIVPVKTPT
VPDSPGYVGPTRAGSEECVFYTDEVASPLAPDLAKASPKRLSLPNTAWGSQSPEVASYGGGAAVGLATED
EEQQLAANRHSLVEKLGELVAGAHALGEGQFPFPTALSATPSEETPTPPPAATSDPPAEDMLVAIRRGVR
LRRTVTNDRSAPRIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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