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Report for CCDS20773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20773.1 Public Mus musculus 7 Zfp667 23 108 98 CCDS HistoryNCBI Gene:384763Re-query CCDS DB by CCDS ID:20773.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20773.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086327.11 ENSMUSP00000083507.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086327.11Link to Ensembl Protein Viewer:ENSMUSP00000083507.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000086327Re-query CCDS DB by Protein ID:ENSMUSP00000083507
Original member Current member EBI ENSMUST00000108562.1 ENSMUSP00000104202.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108562.1Link to Ensembl Protein Viewer:ENSMUSP00000104202.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108562Re-query CCDS DB by Protein ID:ENSMUSP00000104202
Original member Current member EBI ENSMUST00000170776.7 ENSMUSP00000128658.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170776.7Link to Ensembl Protein Viewer:ENSMUSP00000128658.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170776Re-query CCDS DB by Protein ID:ENSMUSP00000128658
Original member Current member NCBI NM_001024928.2 NP_001020099.1 Accepted alive Link to Nucleotide Sequence:NM_001024928.2Link to Protein Sequence:NP_001020099.1Re-query CCDS DB by Nucleotide ID:NM_001024928Re-query CCDS DB by Protein ID:NP_001020099Link to BLAST:NP_001020099.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020099.1 609 Q2TL60 609 100% 0 0

Chromosomal Locations for CCDS 20773.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6289405 6289437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6290536 6290662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6293849 6293941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6304588 6306164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGCCTGCAGTCCGCGGGAAATCAAAATCCAAGGCACCAGTGACTTTTGGGGACTTAGCCATCTACTTCT
CCCAGGAGGAATGGGAATGGCTGAGTCCCATGCAGAAAGATTTGTACGAGGATGTCATGTTGGAGAACTA
TCACAATCTAGTCTCAGTTGGTCTTGCCTGCCGGAGGCCAAATATCATCGCCTTGTTGGAGAAAGGGAAA
GCACCATGGGTGATAGAGCCATCAAGAAGGCGCTGGGGTCCTGAATCAGGGTCTAAGTATGAGACCAAGA
AGTTACCACCAAATTCATGTCACAAATCTGGGCCAAGCATCTGTGAGAAACCAACTTCTTCACAACAAAA
GGTTCCCACAGAGAAGGCAAAACATAACAAGAGTTCAGTCCCAAGCAAATCCAAGAAGGAACATTCAGGC
AAGAAATCTTTAAAGTGTAATCTTTGTGGGAAAACCTTTTTTCGAAGCTTATCTCTTAAACTTCATCAAG
ACTTTCACACTGGAGAGAGGTCTTATGAATGCAGTACTTGTAGACACGTTTTCAGGCAGATCTTATCCCT
CATTCTTCATCAGCGGGTTCACAATTGGAATAAAAGCTATGAATGTGATAAGTGTGGGGACATTTTTAAT
AAAAAGTTAACTCTTATGATACATAGAAGAATTCATAATGGAAAGGAAAGTTTTCACCATGAGAAGGCCT
CAGATTCATGCCCCTCCCTCAGTCTACACCGTAATAATCACACTACTGACAGCGTTCACCAGTGCAGGAA
GTGTGGGAAAGTCTTCAGTCGGATGTCATCCCTTTTACTTCATAAGAGGAGTCACAACAGAAAGAAAATA
CAAAAATACAATAAATACAAAAGAGGCTTCAAAAAGCAGCCAGTCCTTGTACATAAAAGAGTTTGTATTG
GAAAGAAAACTCATGAAAGTAAGAAGGCCTTAATTCAGAGTGCCAGGCAGAAAACTTGCCAGTCGGAAAA
CCCTTTTATGTGTGGGAAATGCGGGAAGTCCTTTAGTAGGATCTCAGCCTTAATGCTCCATCAGAGAATT
CACACTTCAGGGAATCCCTACAAATGTGATAAATGTCAGAAAGACTTTGGACGGCTCTCCACCCTTATTC
TGCACCTAAGAATTCATAGTGGGGAGAAGCAGTTTAAGTGCAGCAAGTGTGAGAAGGTGTGTAGTCGCCT
TTCATCCTTTATTCAGCACCAGAAAATTCATAAAAGGAAAAAGAAACTCATTGCATGCAAGGAATGTGGA
AAGATGTTTGGTGGGATGAAAAATCTTAAAGTGCATCTCAACATCCATTCGGAAGAGAAACCTTTCAAGT
GCAATAAATGTAGTAAAGTGTTTGGCCGCCAGTCATTTCTTAGTGAACATCAGAGAATTCATACCGGAGA
GAAGCCCTATCAGTGTGAAGAATGTGGGAAAGCATTCAGCCACCGAATATCTCTTACGCGGCATAAGAGA
ATTCACAGTGAGGACAGACCTTATGAATGTGATCTGTGTGGGAAAGCCTTCAGCCAGAGTGCTCATCTTG
CGCAGCATGAAAGAATTCACACTGGAGAGAAGCCTTACGCATGCAAAATCTGTAAGAAGTCCTTCGCTCA
GCGCATTTCCCTCATTCTCCATGAGAGAAGCCATACTGGGGAGAGACCCTATGAGTGTAATGAATGTGGG
AAGGCTTTCAGTAGTGGTTCCGACCTTATCCGACATCAGAGAAGTCACTCTTCAGAGAAACCATATGAAT
GTAGCAAATGTGGTAAGGCTTATAGTCGGAGCTCATCGCTGATTCGACATCAGAGTATACATTCGGAGGA
AACACCCTAA

Translation (609 aa):
MPAVRGKSKSKAPVTFGDLAIYFSQEEWEWLSPMQKDLYEDVMLENYHNLVSVGLACRRPNIIALLEKGK
APWVIEPSRRRWGPESGSKYETKKLPPNSCHKSGPSICEKPTSSQQKVPTEKAKHNKSSVPSKSKKEHSG
KKSLKCNLCGKTFFRSLSLKLHQDFHTGERSYECSTCRHVFRQILSLILHQRVHNWNKSYECDKCGDIFN
KKLTLMIHRRIHNGKESFHHEKASDSCPSLSLHRNNHTTDSVHQCRKCGKVFSRMSSLLLHKRSHNRKKI
QKYNKYKRGFKKQPVLVHKRVCIGKKTHESKKALIQSARQKTCQSENPFMCGKCGKSFSRISALMLHQRI
HTSGNPYKCDKCQKDFGRLSTLILHLRIHSGEKQFKCSKCEKVCSRLSSFIQHQKIHKRKKKLIACKECG
KMFGGMKNLKVHLNIHSEEKPFKCNKCSKVFGRQSFLSEHQRIHTGEKPYQCEECGKAFSHRISLTRHKR
IHSEDRPYECDLCGKAFSQSAHLAQHERIHTGEKPYACKICKKSFAQRISLILHERSHTGERPYECNECG
KAFSSGSDLIRHQRSHSSEKPYECSKCGKAYSRSSSLIRHQSIHSEETP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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