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Report for CCDS20630.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20630.1 Public Mus musculus 6 Tas2r131 23 108 98 CCDS HistoryNCBI Gene:387356Re-query CCDS DB by CCDS ID:20630.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20630.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000082085.4 ENSMUSP00000080736.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082085.4Link to Ensembl Protein Viewer:ENSMUSP00000080736.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000082085Re-query CCDS DB by Protein ID:ENSMUSP00000080736
Original member Current member NCBI NM_207030.1 NP_996913.1 Accepted alive Link to Nucleotide Sequence:NM_207030.1Link to Protein Sequence:NP_996913.1Re-query CCDS DB by Nucleotide ID:NM_207030Re-query CCDS DB by Protein ID:NP_996913Link to BLAST:NP_996913.1

Chromosomal Locations for CCDS 20630.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 132956912 132957844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGTATATGATACTGGTAAGAGCAGTATTTATAACTGGAATGCTGGGAAATATGTTCATTGGACTGGCAA
ACTGCTCTGACTGGGTCAAGAACCAGAAAATCACCTTCATCAACTTCATCATGGTCTGTTTGGCAGCTTC
CAGAATCAGCTCTGTGCTGATGTTATTTATTGATGCAACCATACAAGAACTAGCGCCTCATTTCTATTAT
TCTTACCGTCTAGTAAAATGCTCTGATATATTCTGGGTTATAACTGATCAACTATCAACATGGCTTGCCA
CCTGCCTGAGCATATTCTACTTATTCAAAGTAGCCCACATTTCCCATCCCCTTTTCCTCTGGTTTAAGTG
GAGATTGAGAGGTGTGCTTGTTGTTTTTCTTGTATTTTCTTTGTTCTTATTGATTTCTTATTTTCTACTG
CTTGAAACACTTCCTATTTGGGGAGATATTTATGTAACCCTTAAAAACAATCTGACCTTATTTTCAGGTA
CAATTAAGACCACTGCTTTTCAAAAGATAATTGTTTTTGATATAATATATTTAGTCCCATTTCTTGTGTC
CCTAGCATCATTGCTCCTTTTATTTTTGTCCTTGGTGAAACACTCCCGAAGCCTTGACCTGATTTCTACC
ACTTCTGAAGATTCCAGAACCAAGATTCATAAGAAGGCCATGAAAATGCTGGTGTCTTTCCTCATTCTCT
TTATAATTCACATTTTTTTCATGCAGTTAGCACGGTGGTTATTATTTTTGTTTCCAATGAGCAGGCCAAT
TAATTTCATCTTAACATTAAATATCTTTGCCTTAACTCACTCATTTATTCTCATCCTGGGAAATAGCAAT
CTTCGACAGAGAGCAATGAGGATCCTGCAACATCTTAAAAGCCAGCTTCAAGAGCTGATCCTCTCCCTTC
ATAGATTCTCCAGTCTTTACTAG

Translation (310 aa):
MYMILVRAVFITGMLGNMFIGLANCSDWVKNQKITFINFIMVCLAASRISSVLMLFIDATIQELAPHFYY
SYRLVKCSDIFWVITDQLSTWLATCLSIFYLFKVAHISHPLFLWFKWRLRGVLVVFLVFSLFLLISYFLL
LETLPIWGDIYVTLKNNLTLFSGTIKTTAFQKIIVFDIIYLVPFLVSLASLLLLFLSLVKHSRSLDLIST
TSEDSRTKIHKKAMKMLVSFLILFIIHIFFMQLARWLLFLFPMSRPINFILTLNIFALTHSFILILGNSN
LRQRAMRILQHLKSQLQELILSLHRFSSLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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