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Report for CCDS82368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82368.1 Public Homo sapiens 19 MEIOSIN 24 110 108 CCDS HistoryNCBI Gene:388553Re-query CCDS DB by CCDS ID:82368.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82368.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457052.3 ENSP00000402674.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000457052.3Link to Ensembl Protein Viewer:ENSP00000402674.3Re-query CCDS DB by Nucleotide ID:ENST00000457052Re-query CCDS DB by Protein ID:ENSP00000402674
Original member Current member NCBI NM_001310124.2 NP_001297053.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001310124.2Link to Protein Sequence:NP_001297053.1Re-query CCDS DB by Nucleotide ID:NM_001310124Re-query CCDS DB by Protein ID:NP_001297053Link to BLAST:NP_001297053.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297053.1 638 C9JSJ3 638 100% 0 0

Chromosomal Locations for CCDS 82368.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45735377 45735447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45739626 45739730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45745192 45745321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45750675 45750786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45753651 45753788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45754479 45754724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45755970 45756078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45757177 45757277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45758878 45759033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45759414 45759490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45761679 45761867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45761939 45762183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45763338 45763427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45763971 45764118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGTTTGGTTCCAGCAGATACTTGGGTTCCTCTGAACAGCCCAGAGCTAATTCACTGGGTCCCAGTGACA
GGACCTTGGTTTTGTGCTCCCTAGTGGAAGGGGAAGATAAGGTCAACCCCTCCGAACCACATGGACTGAG
AATGGAGGAGAAATGGTTGCTCAAAGGAAAACTGAGGAATCAGAGGAACCAAAACAAGCTCCTGTCCCCA
AACAAGAAGCAGAGGAAAAACCACACTAGCAAGCTGCAAGAGTTGGCACTGCTGCTGCCCATAGCCCTGA
AGACGGGGACCAAGAAGCTCACAAAGAAGGAGATTCTGGTGCATGTCCTGCAGTACATTCAGTACCTCCA
GAGAAACATCGATGCCGCCAAGGCCTTGTTCAAATGCCACATCACCACTGGGGAAGGTGGACTTGCGGGG
CTGGGTCAGAAACCAGCCTGGGGCCCAGCCAGGCGGAGGAGACACTCTACCCCCTCCAGCTCCCCAAGCT
CTCAGAAGTCCTGTCTCCAGGGGGCGTGCCAGAAGCCTCGGAAGAAGAAGCTGACCCAGGCATCAGAAAG
CCAGACTCGGACCCCGAAGCCTCGCCGCTCTCTGGCCCTGAACAAGCCTGAGAAGCTGGTGGCCCCATCC
CCAGACCAGAAAGGAAGTGGCACAGGGGGGACCACTACCCCTCCAAGGTGCCCTGACTCCTGCGGTCACC
CGAGGCCTGCATCATCCTCACCTCCAGGTGACAGAAAAGGAGGACAGTCCCAGCTGACGCTGTTGGATCT
GGCCGAGGACACCATCCACTGTGACATCTCAAGCTGCTGGTGCCAGGGCAGTGTCCAGGATGACGCACCT
TTCCCTGCGCTCCTGGCTCAGGAAGATGTGGCGAGGATCCATTTTCTCAACAAGACCCAGCCCCATCCCA
GGCAGAAGCTGGTGTTCTATGATTCCAGCGAGGATGTGGACAAAGGGTCCCTAGACGCTGACCCTTGGCT
CCCTGCCTGGACCCCAGAGAACAGCCCCCAAGGGAGCCCACTGTTCCTGGGGCCTCCCCAGATTGATGTC
TGGAGTGGAACAGGCCACCCAAGTGAGATCCTCGGGCTCAGCCCTAGCCTTTTCAGCTCCCCAGGGAAAC
TGCTGCCAGACGAGATCTTGGAGGATGACATGGAGTACCTGACCCAAGCGGCTTTCTTTGAAGAAGTGTG
CTTAGATCTGGAGTCTTCACCTTCAGCCTACACGCAGGAGGCTCCACAGGAAAAGGACACAGCCTCCAAG
GCCCCCAAAGACCCTCCTGAGTCCCACAGCCTGCACCGGTCCTCAGTCTCGCTGGACCACTGCTACCTCT
CGCTGAGCGGGAACAGCAAGGCGCCATCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCCAGCTCGGAGGA
CAGCGACTCGGAGCCCCTGTGGAAGCAGCGAGAGGATATGCAGGCCAACCCTGTGGGCACGCCGGGCTCC
AGCGAAGAGGACGAAGACACCACATGGACCCCCACCCGGCTGGCCTCACCCCTGCTGGCAGCTGAGAAAA
AGGCCACGAAGGGCCAAGTAGCCAGGGCCCCTGTGAAGCCCAAGGAGAAGAAGAAAGGCCCCTGCCCACC
CCAGATGAAGAAGAAGTGTGTCAACGGCTTCATCATGTTCTGCAGGATGAACCGGAAGCAGTACATCCGA
TCCTGCCCTGGAACCGCTTCCACAGCTGCCACCAAGGAGCTGGCCCAGCTGTGGCGGGTGATGACCCAGC
AGGAGCGGAGGCCATACTGCACCAAGGCTCGCAGGTTCAGCCGCCAGCACAACCGCATCGTGAAGCAGGA
CGGCTCCAGCAGCGAGGCTGAGGACTGGGAGACGCCAAAGCCCTTCTACCAGCTGCTGGCCGAGAAGGCC
TTGCCGCTGCCCCCGCACCTCCAGTGA

Translation (638 aa):
MFGSSRYLGSSEQPRANSLGPSDRTLVLCSLVEGEDKVNPSEPHGLRMEEKWLLKGKLRNQRNQNKLLSP
NKKQRKNHTSKLQELALLLPIALKTGTKKLTKKEILVHVLQYIQYLQRNIDAAKALFKCHITTGEGGLAG
LGQKPAWGPARRRRHSTPSSSPSSQKSCLQGACQKPRKKKLTQASESQTRTPKPRRSLALNKPEKLVAPS
PDQKGSGTGGTTTPPRCPDSCGHPRPASSSPPGDRKGGQSQLTLLDLAEDTIHCDISSCWCQGSVQDDAP
FPALLAQEDVARIHFLNKTQPHPRQKLVFYDSSEDVDKGSLDADPWLPAWTPENSPQGSPLFLGPPQIDV
WSGTGHPSEILGLSPSLFSSPGKLLPDEILEDDMEYLTQAAFFEEVCLDLESSPSAYTQEAPQEKDTASK
APKDPPESHSLHRSSVSLDHCYLSLSGNSKAPSSSSSSSSSSSSSEDSDSEPLWKQREDMQANPVGTPGS
SEEDEDTTWTPTRLASPLLAAEKKATKGQVARAPVKPKEKKKGPCPPQMKKKCVNGFIMFCRMNRKQYIR
SCPGTASTAATKELAQLWRVMTQQERRPYCTKARRFSRQHNRIVKQDGSSSEAEDWETPKPFYQLLAEKA
LPLPPHLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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