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Report for CCDS33122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33122.1 Public Homo sapiens 19 ZNF470 24 110 108 CCDS HistoryNCBI Gene:388566Re-query CCDS DB by CCDS ID:33122.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33122.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330619.13 ENSP00000333223.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330619.13Link to Ensembl Protein Viewer:ENSP00000333223.7Re-query CCDS DB by Nucleotide ID:ENST00000330619Re-query CCDS DB by Protein ID:ENSP00000333223
Original member Current member EBI ENST00000391709.4 ENSP00000375590.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391709.4Link to Ensembl Protein Viewer:ENSP00000375590.3Re-query CCDS DB by Nucleotide ID:ENST00000391709Re-query CCDS DB by Protein ID:ENSP00000375590
Original member Current member NCBI NM_001001668.4 NP_001001668.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001668.4Link to Protein Sequence:NP_001001668.3Re-query CCDS DB by Nucleotide ID:NM_001001668Re-query CCDS DB by Protein ID:NP_001001668Link to BLAST:NP_001001668.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001668.3 717 Q6ECI4-1 717 100% 0 0

Chromosomal Locations for CCDS 33122.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56570312 56570371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56574394 56574520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56574638 56574733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56576713 56578583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2154 nt):
ATGAAGAGCCAGGAAGAGGTAGAGGTGGCAGGAATTAAACTTTGTAAAGCCATGTCCCTGGGTTCAGTGA
CTTTCACAGATGTGGCCATAGACTTTTCCCAAGATGAATGGGAGTGGCTGAATCTTGCTCAGAGAAGTTT
GTACAAGAAGGTGATGTTAGAAAACTACAGGAACCTAGTTTCAGTGGGTCTTTGCATTTCTAAACCAGAT
GTGATCTCCTTACTGGAGCAAGAGAAAGACCCTTGGGTGATAAAAGGAGGGATGAACAGAGGCCTGTGCC
CAGACTTGGAGTGTGTGTGGGTGACCAAATCATTATCTTTAAACCAGGATATTTATGAAGAAAAATTACC
CCCGGCAATCATAATGGAAAGACTTAAAAGCTATGACCTTGAATGTTCAACATTAGGGAAAAACTGGAAA
TGTGAAGACTTGTTTGAGAGGGAGCTTGTAAACCAGAAGACACATTTTAGGCAAGAGACCATCACTCATA
TAGATACTCTTATTGAAAAAAGAGATCACTCTAACAAATCTGGGACAGTTTTTCATCTGAATACATTATC
TTATATAAAACAGATTTTTCCCATGGAAGAGAGAATATTTAATTTTCATACAGATAAGAAAAGCTTAAAA
ACACATTCAGTTGTGAAAAAACACAAGCAAGACCGTGGAGAAAAGAAACTTTTAAAATGTAATGACTGTG
AGAAAATATTCAGCAAAATCTCAACCCTTACTCTTCACCAAAGAATTCATACAGGAGAGAAACCCTATGA
ATGTATTGAATGTGGAAAGGCCTTTAGCCAGAGTGCCCACCTTGCTCAACATCAGAGAATACACACAGGA
GAAAAACCTTTTGAATGTACTGAATGTGGGAAAGCCTTCAGCCAGAATGCTCATCTTGTTCAACACCAGA
GAGTTCATACTGGAGAGAAACCTTATCAGTGTAAGCAGTGTAATAAAGCATTCAGCCAGCTTGCACACCT
TGCTCAACATCAGAGGGTCCACACTGGAGAGAAACCCTATGAATGTATTGAATGTGGGAAGGCTTTTAGT
GATTGCTCATCCCTAGCTCATCATCGAAGGATTCACACTGGGAAAAGACCTTATGAATGTATTGACTGTG
GGAAAGCTTTCAGGCAGAATGCTTCTCTTATACGTCATCGGCGATATTATCATACTGGAGAGAAACCCTT
TGACTGTATTGATTGTGGGAAGGCTTTCACTGATCACATAGGACTTATTCAGCATAAGAGAACTCATACT
GGAGAGAGACCTTACAAATGTAATGTGTGTGGGAAGGCTTTTAGCCATGGCTCATCTCTGACAGTACATC
AGAGAATTCATACAGGAGAGAAACCTTATGAATGCAATATCTGTGAGAAAGCCTTCAGCCATCGTGGGTC
TCTTACTCTTCATCAGAGAGTTCATACTGGAGAGAAACCCTATGAATGTAAAGAATGTGGGAAAGCTTTC
CGGCAGAGCACGCATCTGGCTCATCATCAGAGAATTCATACTGGAGAGAAACCTTATGAATGTAAGGAAT
GCAGCAAAACCTTCAGCCAGAATGCACACCTCGCGCAACATCAGAAAATACACACTGGGGAGAAACCTTA
TGAATGTAAGGAATGTGGTAAGGCCTTCAGTCAGATTGCACACCTTGTTCAGCACCAGAGAGTTCATACT
GGTGAGAAGCCTTACGAATGTATTGAATGTGGGAAGGCCTTTAGTGATGGCTCATATCTTGTTCAACATC
AGAGACTCCACAGTGGCAAAAGACCGTATGAATGTCTTGAATGTGGGAAGGCATTCAGGCAGAGGGCATC
CTTGATTTGTCATCAGAGATGTCATACTGGTGAGAAACCTTATGAATGTAATGTTTGTGGGAAAGCCTTT
AGCCATCGTAAATCCCTTACTCTGCATCAGAGAATTCATACAGGAGAGAAACCTTATGAGTGTAAGGAAT
GTAGCAAAGCCTTCAGCCAGGTTGCCCATCTTACTCTACATAAGAGAATTCATACTGGAGAAAGGCCCTA
TGAGTGTAAAGAATGTGGAAAAGCCTTCAGGCAGAGTGTACATCTTGCTCATCATCAGCGAATTCATACC
GGAGAGTCATCAGTTATTCTCTCCTCTGCCCTCCCATACCACCAAGTCCTATAG

Translation (717 aa):
MKSQEEVEVAGIKLCKAMSLGSVTFTDVAIDFSQDEWEWLNLAQRSLYKKVMLENYRNLVSVGLCISKPD
VISLLEQEKDPWVIKGGMNRGLCPDLECVWVTKSLSLNQDIYEEKLPPAIIMERLKSYDLECSTLGKNWK
CEDLFERELVNQKTHFRQETITHIDTLIEKRDHSNKSGTVFHLNTLSYIKQIFPMEERIFNFHTDKKSLK
THSVVKKHKQDRGEKKLLKCNDCEKIFSKISTLTLHQRIHTGEKPYECIECGKAFSQSAHLAQHQRIHTG
EKPFECTECGKAFSQNAHLVQHQRVHTGEKPYQCKQCNKAFSQLAHLAQHQRVHTGEKPYECIECGKAFS
DCSSLAHHRRIHTGKRPYECIDCGKAFRQNASLIRHRRYYHTGEKPFDCIDCGKAFTDHIGLIQHKRTHT
GERPYKCNVCGKAFSHGSSLTVHQRIHTGEKPYECNICEKAFSHRGSLTLHQRVHTGEKPYECKECGKAF
RQSTHLAHHQRIHTGEKPYECKECSKTFSQNAHLAQHQKIHTGEKPYECKECGKAFSQIAHLVQHQRVHT
GEKPYECIECGKAFSDGSYLVQHQRLHSGKRPYECLECGKAFRQRASLICHQRCHTGEKPYECNVCGKAF
SHRKSLTLHQRIHTGEKPYECKECSKAFSQVAHLTLHKRIHTGERPYECKECGKAFRQSVHLAHHQRIHT
GESSVILSSALPYHQVL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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