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Report for CCDS46924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46924.1 Public Homo sapiens 3 PRR23C 24 110 108 CCDS HistoryNCBI Gene:389152Re-query CCDS DB by CCDS ID:46924.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000413199.1 ENSP00000396648.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000413199.1Link to Ensembl Protein Viewer:ENSP00000396648.1Re-query CCDS DB by Nucleotide ID:ENST00000413199Re-query CCDS DB by Protein ID:ENSP00000396648
Original member Current member NCBI NM_001134657.1 NP_001128129.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134657.1Link to Protein Sequence:NP_001128129.1Re-query CCDS DB by Nucleotide ID:NM_001134657Re-query CCDS DB by Protein ID:NP_001128129Link to BLAST:NP_001128129.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128129.1 262 Q6ZRP0 262 100% 0 0

Chromosomal Locations for CCDS 46924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 139043832 139044620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGGCAGCCGGCCCTGCAGCCCCAGCGCCTGCCTTGCGCCCTGGTGGGGACAGCAGCCAGGAGGACCAG
GCCCTGCCAAGCGCAGCCGATTGGAGGAGCCCGCGGGCCCCGAATCCCGAGCGGCGCCCAGCCCGGAAGA
CCCGGCGGGGACCCCGGCCGTGGACGCGCTCACCTCCATGGTGGTCCTGGACGCGGGCTGTGCCCTGCGT
GTGCCCCTGGAGGACGTCGACCTGGTGCTGGAGCTCGCGCCAATGTCGGTCCTGCGAGTGTCTCTTGGTG
GACACACCCTCATCGTGATCCCCGAGGTCCTCCTGAGCTCCGTCGACGAATGCTCAGGAGCGCAGGGCGA
CTGGTCTGCCGGCCTGGAAGTGGACGTTTTCCTGGGCGCTCACGGGGAAGACGTCGTCGTCGAGCAGGAA
GTCTGCGCATCTGTCCCAGAGATCGCTGCCGAGGAAGAGGCCTACGAGGAGGACGCGGACTCTGAGTTCC
CGGAGCTCTGGATGGACTCCGCAGCCGGCTCAGCCGCTGGGCTCTACCCCTCCGCTAGAAGTATGTTCAG
CCCCTACCGGGAGGGCCCCATCCGAGGGCCCTGTGCTCTGGCCCCCAACCCCAGTTCAGAGAGACGCTCT
CCACGCCCCATCTTCGACCTGGAATTCCATCTTCTGGAGCCTGTCCCCAGCTCACCTCTCCAACCTCTAC
CTCCCTCTCCGAGTCCAGGTCCCCACGCGCGCCCGGAGCTCCCAGAGCGCCCTCCGTGCAAGGTCCGAAG
ACGCCTGTTCCAGGAATGA

Translation (262 aa):
MGSRPCSPSACLAPWWGQQPGGPGPAKRSRLEEPAGPESRAAPSPEDPAGTPAVDALTSMVVLDAGCALR
VPLEDVDLVLELAPMSVLRVSLGGHTLIVIPEVLLSSVDECSGAQGDWSAGLEVDVFLGAHGEDVVVEQE
VCASVPEIAAEEEAYEEDADSEFPELWMDSAAGSAAGLYPSARSMFSPYREGPIRGPCALAPNPSSERRS
PRPIFDLEFHLLEPVPSSPLQPLPPSPSPGPHARPELPERPPCKVRRRLFQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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