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Report for CCDS79528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79528.1 Public Mus musculus 17 Zfp811 23 108 98 CCDS HistoryNCBI Gene:240063Re-query CCDS DB by CCDS ID:79528.1Re-query CCDS DB by GeneID:240063See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 79528.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000200914.4 ENSMUSP00000144038.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000200914.4Link to Ensembl Protein Viewer:ENSMUSP00000144038.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000200914Re-query CCDS DB by Protein ID:ENSMUSP00000144038
Original member Current member NCBI NM_183177.3 NP_899000.2 Accepted alive Link to Nucleotide Sequence:NM_183177.3Link to Protein Sequence:NP_899000.2Re-query CCDS DB by Nucleotide ID:NM_183177Re-query CCDS DB by Protein ID:NP_899000Link to BLAST:NP_899000.2

Chromosomal Locations for CCDS 79528.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32797406 32798873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32800387 32800447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32800812 32800938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 32809782 32809784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1659 nt):
ATGGAGCTGGTGACCTTCGAGGATGTGGCTGTGCACTTCACCATGGAGGAGTGGGCTCTGCTGGATCTAT
CCCAAAAGGAGCTCTACAAAGACGTGATGAAGGAGATATTGAGAAATGTGGTTTCCATAGGAGACATAAG
GAAACACCAAAAGATTGACAATAAATACCAAAATTCTGGGAGAAAACTAAGATGTCAACTTGTGGAGAAA
CTCCATGACTGTAAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTCTCTACAGAGGGCACTGTGAACC
ATGAATTTTATCCAGGAGTACATATATGTAAAAGAAATGGGTTTGTCAATGTACTCATTGGCCATTTAGC
TATAAATGTGCGACTGAAACCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAATGTG
TATACTAAGGAATCTCAGGGCACCTCCAGCGCTTCCCCGTCTCTTCAGAAGCATCAAAGTGCTGAGCCTG
CAGAGAAATCTGATAAAACTAAACAGCCTGATGAAGACTTGAGACTTGGTCAGAATCATGAAAGGACTCC
TGCTGAAGAAAAACACCACAAATGTAAACACTGTGGGAAAGCTTGTACTTCTCTCAGCTCCTTGAAGAGG
CATGAACAACATTACCATGCAAAGAAATGCTCTAAGTGTAAGCAGTGTGGGAAAGCCTTCCCTTTCCCGA
GTTCCCTACAAGTCCACCAAAGGATCCACACTGGAGAAAAGCCCTATGCGTGTAAGACGTGTGGGAAGAC
CTTTGGACATTCCAGTTCTCTCCTAAGACATGAAAGAATCCACACTGGCTCGAGTCCCCATGAGTGTAAA
CTGTGCAAGAAAACCTTTACTCGTTTGAATTCGCTTTTAAGGCACAAAATAATTCATACTGGTGAGAAGC
CCTATGCATGTAATCAGTGTGGGAAAGCTTTCTCTCGATCCGCTTCCCTTCAGAGACACACAAGACTCCA
CACTGGAGAGAAACCCTATGTGTGTAAGCAGTGTGGGAAAGCCTTCATTACCTCTACTTACCTACAAGTT
CATGAACGAACTCACACTGGGGAAAAACCATATGTATGTAAGGAGTGTGGGAGCACCTTCATGCTTTGGA
CTCAATTCCAAAAGCATAAAATAGTTCACAGCGGTGTGAATCCCTTTGTTTGTAAGCAATGCGGGAAGGC
TTTCACTCGTCTTGGTACCCTACAGATACATGAGAGAATTCACACTGGTGAGAAGCCCTATGTGTGTAAG
CAGTGTGCAAAAGCCTTCATGTCTTTGACTCAGTTAAGACGACATGAAATAATCCACAGTGGCATCAAAC
CCTACATGTGCAAACAATGTGGAAAGGGGTTTCTCTGCTCTACTACTCTTCGGAGTCATGAGAAGATCCA
CAGTGGCAGTAACCCGTATGTATGTTCTCAATGTGAGAAAGTTGTGAGTTCTGAGAGCGCTTTGCGGAAA
CATAAAATGATTCACACTGGAGAGAAGCCTTGTGTCTGTAAGCAATGTGGCAAAACATTCACTCATTTAA
GTTCTCTTCAGTACCATGCACTGATGCACAGCGGAGAGAAACCCCATGAATGTAAGAAATGCGGGAAAGG
CTTTCGGTCTCTTAGTCACCTTAAAAAGCACGAGAGAACTCAACACTAA

Translation (552 aa):
MELVTFEDVAVHFTMEEWALLDLSQKELYKDVMKEILRNVVSIGDIRKHQKIDNKYQNSGRKLRCQLVEK
LHDCKEGHECAEIFKFSTEGTVNHEFYPGVHICKRNGFVNVLIGHLAINVRLKPRPGQKSNEVQEHGKNV
YTKESQGTSSASPSLQKHQSAEPAEKSDKTKQPDEDLRLGQNHERTPAEEKHHKCKHCGKACTSLSSLKR
HEQHYHAKKCSKCKQCGKAFPFPSSLQVHQRIHTGEKPYACKTCGKTFGHSSSLLRHERIHTGSSPHECK
LCKKTFTRLNSLLRHKIIHTGEKPYACNQCGKAFSRSASLQRHTRLHTGEKPYVCKQCGKAFITSTYLQV
HERTHTGEKPYVCKECGSTFMLWTQFQKHKIVHSGVNPFVCKQCGKAFTRLGTLQIHERIHTGEKPYVCK
QCAKAFMSLTQLRRHEIIHSGIKPYMCKQCGKGFLCSTTLRSHEKIHSGSNPYVCSQCEKVVSSESALRK
HKMIHTGEKPCVCKQCGKTFTHLSSLQYHALMHSGEKPHECKKCGKGFRSLSHLKKHERTQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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