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Report for CCDS31384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31384.1 Public Homo sapiens 11 OR52D1 24 110 108 CCDS HistoryNCBI Gene:390066Re-query CCDS DB by CCDS ID:31384.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31384.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322641.5 ENSP00000326232.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322641.5Link to Ensembl Protein Viewer:ENSP00000326232.5Re-query CCDS DB by Nucleotide ID:ENST00000322641Re-query CCDS DB by Protein ID:ENSP00000326232
Original member Current member NCBI NM_001005163.2 NP_001005163.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005163.2Link to Protein Sequence:NP_001005163.1Re-query CCDS DB by Nucleotide ID:NM_001005163Re-query CCDS DB by Protein ID:NP_001005163Link to BLAST:NP_001005163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005163.1 318 Q9H346 318 100% 0 0

Chromosomal Locations for CCDS 31384.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5488707 5489663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGTCAGATTCCAACCTCAGTGATAACCATCTTCCAGACACCTTCTTCTTAACAGGGATCCCAGGGCTGG
AGGCTGCCCACTTCTGGATTGCCATCCCTTTCTGTGCCATGTATCTTGTAGCACTGGTTGGAAATGCTGC
CCTCATCCTGGTCATTGCCATGGACAATGCTCTTCATGCACCTATGTACCTCTTCCTCTGCCTTCTCTCA
CTCACAGACCTGGCTCTCAGTTCTACCACTGTGCCCAAGATGCTGGCCATTTTGTGGCTCCATGCTGGTG
AGATTTCCTTTGGTGGATGCCTGGCCCAGATGTTTTGTGTCCATTCTATCTATGCTCTGGAGTCCTCAAT
TCTACTTGCCATGGCCTTTGATAGGTATGTGGCTATCTGTAACCCATTAAGGTACACAACCATTCTCAAC
CATGCTGTCATAGGCAGAATTGGCTTTGTTGGGCTATTCCGTAGTGTGGCTATTGTCTCCCCCTTCATCT
TCTTGCTGAGGCGACTCCCCTACTGTGGTCACCGTGTCATGACACACACATACTGTGAGCATATGGGCAT
TGCCCGACTGGCCTGTGCCAACATCACTGTCAATATTGTCTATGGGCTAACTGTGGCTCTGCTGGCCATG
GGACTGGATTCCATTCTCATTGCCATTTCCTATGGCTTTATCCTCCATGCAGTCTTTCATCTTCCATCTC
ATGATGCCCAGCACAAAGCTCTGAGTACCTGTGGCTCCCACATTGGCATCATCCTGGTTTTCTACATCCC
TGCCTTCTTCTCCTTCCTCACCCACCGCTTTGGTCACCACGAAGTCCCCAAGCATGTGCACATCTTTCTG
GCTAATCTCTATGTGCTGGTGCCTCCTGTACTCAATCCTATTCTCTATGGAGCTAGAACCAAGGAGATTC
GGAGTCGACTTCTAAAACTGCTTCACCTGGGGAAGACTTCAATATGA

Translation (318 aa):
MSDSNLSDNHLPDTFFLTGIPGLEAAHFWIAIPFCAMYLVALVGNAALILVIAMDNALHAPMYLFLCLLS
LTDLALSSTTVPKMLAILWLHAGEISFGGCLAQMFCVHSIYALESSILLAMAFDRYVAICNPLRYTTILN
HAVIGRIGFVGLFRSVAIVSPFIFLLRRLPYCGHRVMTHTYCEHMGIARLACANITVNIVYGLTVALLAM
GLDSILIAISYGFILHAVFHLPSHDAQHKALSTCGSHIGIILVFYIPAFFSFLTHRFGHHEVPKHVHIFL
ANLYVLVPPVLNPILYGARTKEIRSRLLKLLHLGKTSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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