NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32032.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32032.2 Under review, update Homo sapiens 14 OR11G2 24 110 108 CCDS HistoryNCBI Gene:390439Re-query CCDS DB by CCDS ID:32032.2See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Polymorphic pseudogene

Sequence IDs included in CCDS 32032.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641682.1 ENSP00000493171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641682.1Link to Ensembl Protein Viewer:ENSP00000493171.1Re-query CCDS DB by Nucleotide ID:ENST00000641682Re-query CCDS DB by Protein ID:ENSP00000493171
Original member Current member EBI ENST00000641879.2 ENSP00000493427.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641879.2Link to Ensembl Protein Viewer:ENSP00000493427.1Re-query CCDS DB by Nucleotide ID:ENST00000641879Re-query CCDS DB by Protein ID:ENSP00000493427
Original member Current member NCBI NM_001005503.2 NP_001005503.2 Pending alive Link to Nucleotide Sequence:NM_001005503.2Link to Protein Sequence:NP_001005503.2Re-query CCDS DB by Nucleotide ID:NM_001005503Re-query CCDS DB by Protein ID:NP_001005503Link to BLAST:NP_001005503.2
Original member Current member NCBI NM_001386033.1 NP_001372962.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386033.1Link to Protein Sequence:NP_001372962.1Re-query CCDS DB by Nucleotide ID:NM_001386033Re-query CCDS DB by Protein ID:NP_001372962Link to BLAST:NP_001372962.1

Chromosomal Locations for CCDS 32032.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20197438 20198373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGAAAATCTTCAACAGCCCCAGCAACTCCAGCACCTTCACTGGCTTCATCCTCCTGGGCTTCCCTTGCC
CCAGGGAGGGGCAGATCCTCCTCTTTGTGCTCTTCACTGTTGTTTACCTCCTGACCCTCATGGGCAATGG
TTCCATCATCTGTGCTGTGCACTGGGATCAGAGACTCCACGCCCCCATGTACATCCTGCTCGCCAACTTC
TCCTTCTTGGAGATATGTTATGTCACCTCCACAGTCCCCAGCATGCTGGCCAACTTCCTCTCTGACACCA
AGATCATCTCGTTCTCTGGCTGCTTCCTCCAGTTCTACTTTTTCTTCTCCTTGGGCTCTACAGAATGCTT
TTTCCTGGCAGTTATGGCATTTGATCGATACCTTGCCATCTGTCGGCCTCTACGCTATCCAACCATTATG
ACCAGACGTCTCTGTACCAATCTTGTGGTCAATTGCTGGGTACTTGGTTTCATCTGGTTCTTGATTCCTA
TCGTCAACATCTCCCAAATGTCCTTCTGTGGATCTAGGATTATTGACCACTTCCTATGTGACCCAGCTCC
TCTTCTAACTCTCACTTGCAAAAAAGGCCCTGTGATAGAGCTTGTCTTTTCTGTCTTAAGTCCTCTGCCT
GTCTTTATGCTCTTTCTCTTCATTGTGGGGTCCTATGCTCTGGTCGTGAGAGCTGTGTTGAGGGTCCCTT
CAGCAGCTGGGAGAAGAAAGGCTTTCTCCACCTGTGGGTCTCACCTGGCTGTGGTTTCACTGTTCTACGG
CTCAGTACTGGTCATGTATGGGAGCCCACCATCTAAGAATGAAGCTGGAAAGCAGAAGACTGTGACTCTG
TTTTATTCTGTTGTTACCCCACTGCTTAACCCTGTGATATATAGTCTTAGGAACAAAGATATGAGAAAAG
CTCTGAAGAAATTTTGGGGAACATAA

Translation (311 aa):
MKIFNSPSNSSTFTGFILLGFPCPREGQILLFVLFTVVYLLTLMGNGSIICAVHWDQRLHAPMYILLANF
SFLEICYVTSTVPSMLANFLSDTKIISFSGCFLQFYFFFSLGSTECFFLAVMAFDRYLAICRPLRYPTIM
TRRLCTNLVVNCWVLGFIWFLIPIVNISQMSFCGSRIIDHFLCDPAPLLTLTCKKGPVIELVFSVLSPLP
VFMLFLFIVGSYALVVRAVLRVPSAAGRRKAFSTCGSHLAVVSLFYGSVLVMYGSPPSKNEAGKQKTVTL
FYSVVTPLLNPVIYSLRNKDMRKALKKFWGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH