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Report for CCDS85820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85820.1 Public Mus musculus X Nbdy 23 108 98 CCDS HistoryNCBI Gene:70123Re-query CCDS DB by CCDS ID:85820.1Re-query CCDS DB by GeneID:70123See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85820.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000208235.1 ENSMUSP00000147221.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208235.1Link to Ensembl Protein Viewer:ENSMUSP00000147221.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208235Re-query CCDS DB by Protein ID:ENSMUSP00000147221
Original member Current member NCBI NM_027327.1 NP_081603.1 Accepted alive Link to Nucleotide Sequence:NM_027327.1Link to Protein Sequence:NP_081603.1Re-query CCDS DB by Nucleotide ID:NM_027327Re-query CCDS DB by Protein ID:NP_081603Link to BLAST:NP_081603.1

Chromosomal Locations for CCDS 85820.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153725833 153725841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153728862 153728939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153741040 153741084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (132 nt):
ATGCTAAAGGCTCATCTTATATTTTCTACCCCATTGACCATTTCTCTATTTGACTGTGCCACTTGGAGAC
CGTATTTACAAACTGAGTATTATGATGTAATGACTGTGATTTCACCTCCAGAATTTGGATGA

Translation (43 aa):
MLKAHLIFSTPLTISLFDCATWRPYLQTEYYDVMTVISPPEFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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