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Report for CCDS35659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35659.1 Public Mus musculus 1 Ugt1a5 23 108 98 CCDS HistoryNCBI Gene:394433Re-query CCDS DB by CCDS ID:35659.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35659.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097659.4 ENSMUSP00000095263.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097659.4Link to Ensembl Protein Viewer:ENSMUSP00000095263.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000097659Re-query CCDS DB by Protein ID:ENSMUSP00000095263
Original member Current member NCBI NM_201643.2 NP_964005.2 Accepted alive Link to Nucleotide Sequence:NM_201643.2Link to Protein Sequence:NP_964005.2Re-query CCDS DB by Nucleotide ID:NM_201643Re-query CCDS DB by Protein ID:NP_964005Link to BLAST:NP_964005.2

Chromosomal Locations for CCDS 35659.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 88166052 88166903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215044 88215175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215795 88215882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88216138 88216357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88218127 88218424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGGGACTCCGCATGCCCCTACAAGGATTAGTGGGGCTGCTCCTGCTGTGTGCCCTGCCTTGGACTGAAG
GTGAGAAGGTGCTAGTGTTTCCTGTGGGGGGAAGCCACTGGCTGAGCATGAGGGATGTTGTGAGAGAGCT
CCACGCCCAAGGTCACCAGACTGTGGTCCTGGCTCCAGAGGTGAACATGCGCATCAAAGAAGAGGACTTT
TTCACTTTCAAAGTCTATGCCGTTCCCTATACAAGACAAGAATTGGAAGAAATGATGGAAAACCTTAAAG
TGTTTTTTGACACAGGAAACTATATGAAGAAAATCTTTAAAACATCTGAGGCTTTGAGAAACATGTCAAC
CGTTCTCTTAAAGACTTGTACAAATATATTGCACAACGAGTCCCTGCTCCACCACCTGAATTCCAGCTCC
TTTGATGTAGTCTTTACAGATCCCGTGTTTCCCTGTGGGGCATTGTTGGCCAAGTACTTAGGTATTCCTG
CTGTGTTCTTTCTACGATACATCCCCTGTGGCATAGAATATGAGGCCACACAGTGTCCAAGCCCTTCCTC
TTATATTCCGAACCTATTCACAAGGCTTTCCGACCACATGGACTTCCTGCAAAGGGTCCAGAACATGCTG
TACCATCTGGTCTTGAAGTACATTTGCCATTTATTGATCACTCCCTATGAAAGCCTGGCCTCTGAGCTTT
TTCAGAGAGAAGTGTCCTCAGTGGAGCTTTTCAGCTATGCATCCGTGTGGCTGTTCCGAGGGGACTTTGT
ACTCGACTACCCCAGGCCCATCATGCCTAACATGGTCTTCATTGGGGGCATAAACTGTGTTACCAAGAAG
CCCCTCTCTCAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTGTTTTCTCTTTGG
GATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGGCAGAATTCCTCA
GACGGTCCTGTGGCGCTACACCGGAACTAGACCATCGAATCTTGCAAAGAACACAATTCTTGTCAAATGG
CTACCCCAAAATGATCTGCTTGGTCATCCAAAGACTCGGGCATTCATCACACACTCTGGCTCCCATGGTA
TTTATGAAGGAATATGCAATGGAGTTCCGATGGTGATGATGCCCCTATTTGGCGATCAGATGGACAATGC
CAAGCGCATGGAAACTCGGGGAGCTGGGGTGACCCTGAATGTCCTTGAAATGACTGCTGATGATTTGGAA
AATGCCCTTAAAACTGTCATCAACAACAAGAGCTACAAGGAGAACATCATGCGCCTCTCCAGCCTTCACA
AGGACCGTCCTATAGAGCCTCTGGACCTGGCTGTGTTCTGGGTGGAATACGTGATGAGGCACAAGGGGGC
ACCACACCTGCGCCCGGCCGCCCATGACCTCACCTGGTATCAGTACCACTCCTTGGATGTGATTGGCTTC
CTCCTGGCCATTGTGTTGACAGTGGTCTTCATTGTCTTTAAATGTTGTGCCTATGGCTGCCGGAAATGCT
TTGGGGGAAAGGGGCGAGTGAAGAAATCACACAAATCCAAGACCCATTGA

Translation (529 aa):
MGLRMPLQGLVGLLLLCALPWTEGEKVLVFPVGGSHWLSMRDVVRELHAQGHQTVVLAPEVNMRIKEEDF
FTFKVYAVPYTRQELEEMMENLKVFFDTGNYMKKIFKTSEALRNMSTVLLKTCTNILHNESLLHHLNSSS
FDVVFTDPVFPCGALLAKYLGIPAVFFLRYIPCGIEYEATQCPSPSSYIPNLFTRLSDHMDFLQRVQNML
YHLVLKYICHLLITPYESLASELFQREVSSVELFSYASVWLFRGDFVLDYPRPIMPNMVFIGGINCVTKK
PLSQEFEAYVNASGEHGIVVFSLGSMVSEIPEKKAMEIAEALGRIPQTVLWRYTGTRPSNLAKNTILVKW
LPQNDLLGHPKTRAFITHSGSHGIYEGICNGVPMVMMPLFGDQMDNAKRMETRGAGVTLNVLEMTADDLE
NALKTVINNKSYKENIMRLSSLHKDRPIEPLDLAVFWVEYVMRHKGAPHLRPAAHDLTWYQYHSLDVIGF
LLAIVLTVVFIVFKCCAYGCRKCFGGKGRVKKSHKSKTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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