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Report for CCDS1791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1791.1 Public Homo sapiens 2 CDC42EP3 24 110 108 CCDS HistoryNCBI Gene:10602Re-query CCDS DB by CCDS ID:1791.1Re-query CCDS DB by GeneID:10602See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295324.4 ENSP00000295324.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295324.4Link to Ensembl Protein Viewer:ENSP00000295324.3Re-query CCDS DB by Nucleotide ID:ENST00000295324Re-query CCDS DB by Protein ID:ENSP00000295324
Original member Current member EBI ENST00000611976.1 ENSP00000480549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611976.1Link to Ensembl Protein Viewer:ENSP00000480549.1Re-query CCDS DB by Nucleotide ID:ENST00000611976Re-query CCDS DB by Protein ID:ENSP00000480549
Original member Current member NCBI NM_001270436.2 NP_001257365.1 Accepted alive Link to Nucleotide Sequence:NM_001270436.2Link to Protein Sequence:NP_001257365.1Re-query CCDS DB by Nucleotide ID:NM_001270436Re-query CCDS DB by Protein ID:NP_001257365Link to BLAST:NP_001257365.1
Original member Current member NCBI NM_001270437.2 NP_001257366.1 Accepted alive Link to Nucleotide Sequence:NM_001270437.2Link to Protein Sequence:NP_001257366.1Re-query CCDS DB by Nucleotide ID:NM_001270437Re-query CCDS DB by Protein ID:NP_001257366Link to BLAST:NP_001257366.1
Original member Current member NCBI NM_001270438.2 NP_001257367.1 Accepted alive Link to Nucleotide Sequence:NM_001270438.2Link to Protein Sequence:NP_001257367.1Re-query CCDS DB by Nucleotide ID:NM_001270438Re-query CCDS DB by Protein ID:NP_001257367Link to BLAST:NP_001257367.1
Original member Current member NCBI NM_001371569.1 NP_001358498.1 Accepted alive Link to Nucleotide Sequence:NM_001371569.1Link to Protein Sequence:NP_001358498.1Re-query CCDS DB by Nucleotide ID:NM_001371569Re-query CCDS DB by Protein ID:NP_001358498Link to BLAST:NP_001358498.1
Original member Current member NCBI NM_001371570.1 NP_001358499.1 Accepted alive Link to Nucleotide Sequence:NM_001371570.1Link to Protein Sequence:NP_001358499.1Re-query CCDS DB by Nucleotide ID:NM_001371570Re-query CCDS DB by Protein ID:NP_001358499Link to BLAST:NP_001358499.1
Original member Current member NCBI NM_006449.5 NP_006440.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006449.5Link to Protein Sequence:NP_006440.2Re-query CCDS DB by Nucleotide ID:NM_006449Re-query CCDS DB by Protein ID:NP_006440Link to BLAST:NP_006440.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257365.1 254 Q9UKI2 254 100% 0 0
NP_001257366.1 254 Q9UKI2 254 100% 0 0
NP_001257367.1 254 Q9UKI2 254 100% 0 0
NP_001358498.1 254 Q9UKI2 254 100% 0 0
NP_001358499.1 254 Q9UKI2 254 100% 0 0
NP_006440.2 254 Q9UKI2 254 100% 0 0

Chromosomal Locations for CCDS 1791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 37645823 37646587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGCCAGCCAAGACCCCAATTTACCTGAAAGCAGCCAATAACAAGAAAGGAAAGAAATTTAAACTGAGGG
ACATTCTGTCTCCTGATATGATCAGTCCCCCGCTTGGAGACTTTCGCCACACCATCCACATTGGCAAAGA
GGGCCAGCACGATGTCTTTGGAGATATTTCCTTTCTTCAAGGGAACTACGAGCTTTTACCTGGAAACCAG
GAGAAAGCACACCTGGGCCAGTTCCCTGGGCATAATGAGTTCTTCCGGGCCAACAGCACCTCGGACTCTG
TGTTCACAGAAACGCCCTCCCCGGTGCTCAAAAATGCCATCTCCCTCCCGACCATTGGAGGATCCCAAGC
TCTCATGTTGCCCTTATTGTCACCAGTGACATTTAATTCCAAACAGGAGTCCTTCGGGCCAGCAAAGCTG
CCCAGGCTTAGCTGCGAGCCCGTCATGGAGGAAAAAGCTCAGGAGAAAAGCAGTCTGTTGGAGAATGGGA
CAGTCCACCAGGGAGACACCTCGTGGGGCTCCAGCGGTTCTGCATCTCAGTCCAGCCAAGGCAGAGACAG
CCACTCCTCCAGCCTGTCCGAACAGTACCCCGACTGGCCAGCCGAGGACATGTTTGACCATCCCACCCCA
TGCGAGCTCATCAAGGGAAAGACTAAGTCAGAGGAGTCCCTCTCTGACCTTACAGGTTCCCTCCTCTCCC
TGCAGCTTGATCTTGGGCCCTCACTTTTGGATGAGGTGCTGAATGTAATGGATAAAAATAAGTAA

Translation (254 aa):
MPAKTPIYLKAANNKKGKKFKLRDILSPDMISPPLGDFRHTIHIGKEGQHDVFGDISFLQGNYELLPGNQ
EKAHLGQFPGHNEFFRANSTSDSVFTETPSPVLKNAISLPTIGGSQALMLPLLSPVTFNSKQESFGPAKL
PRLSCEPVMEEKAQEKSSLLENGTVHQGDTSWGSSGSASQSSQGRDSHSSSLSEQYPDWPAEDMFDHPTP
CELIKGKTKSEESLSDLTGSLLSLQLDLGPSLLDEVLNVMDKNK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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