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Report for CCDS8671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8671.1 Public Homo sapiens 12 ARHGDIB 24 110 108 CCDS HistoryNCBI Gene:397Re-query CCDS DB by CCDS ID:8671.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8671.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228945.9 ENSP00000228945.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228945.9Link to Ensembl Protein Viewer:ENSP00000228945.4Re-query CCDS DB by Nucleotide ID:ENST00000228945Re-query CCDS DB by Protein ID:ENSP00000228945
Original member Current member EBI ENST00000541546.5 ENSP00000440560.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541546.5Link to Ensembl Protein Viewer:ENSP00000440560.1Re-query CCDS DB by Nucleotide ID:ENST00000541546Re-query CCDS DB by Protein ID:ENSP00000440560
Original member Current member EBI ENST00000541644.5 ENSP00000444860.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541644.5Link to Ensembl Protein Viewer:ENSP00000444860.1Re-query CCDS DB by Nucleotide ID:ENST00000541644Re-query CCDS DB by Protein ID:ENSP00000444860
Original member Current member NCBI NM_001175.7 NP_001166.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001175.7Link to Protein Sequence:NP_001166.3Re-query CCDS DB by Nucleotide ID:NM_001175Re-query CCDS DB by Protein ID:NP_001166Link to BLAST:NP_001166.3
Original member Current member NCBI NM_001321420.2 NP_001308349.1 Accepted alive Link to Nucleotide Sequence:NM_001321420.2Link to Protein Sequence:NP_001308349.1Re-query CCDS DB by Nucleotide ID:NM_001321420Re-query CCDS DB by Protein ID:NP_001308349Link to BLAST:NP_001308349.1
Original member Current member NCBI NM_001321421.2 NP_001308350.1 Accepted alive Link to Nucleotide Sequence:NM_001321421.2Link to Protein Sequence:NP_001308350.1Re-query CCDS DB by Nucleotide ID:NM_001321421Re-query CCDS DB by Protein ID:NP_001308350Link to BLAST:NP_001308350.1
Original member Current member NCBI NM_001321422.1 NP_001308351.1 Accepted alive Link to Nucleotide Sequence:NM_001321422.1Link to Protein Sequence:NP_001308351.1Re-query CCDS DB by Nucleotide ID:NM_001321422Re-query CCDS DB by Protein ID:NP_001308351Link to BLAST:NP_001308351.1
Original member Current member NCBI NM_001321423.1 NP_001308352.1 Accepted alive Link to Nucleotide Sequence:NM_001321423.1Link to Protein Sequence:NP_001308352.1Re-query CCDS DB by Nucleotide ID:NM_001321423Re-query CCDS DB by Protein ID:NP_001308352Link to BLAST:NP_001308352.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166.3 201 P52566 201 100% 0 0
NP_001308349.1 201 P52566 201 100% 0 0
NP_001308350.1 201 P52566 201 100% 0 0
NP_001308351.1 201 P52566 201 100% 0 0
NP_001308352.1 201 P52566 201 100% 0 0

Chromosomal Locations for CCDS 8671.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 14942522 14942721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14944776 14944839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14947873 14947949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14949802 14949885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 14950532 14950712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGACTGAAAAAGCCCCAGAGCCACATGTGGAGGAGGATGACGATGATGAGCTGGACAGCAAGCTCAATT
ATAAGCCTCCACCACAGAAGTCCCTGAAAGAGCTGCAGGAAATGGACAAAGATGATGAGAGTCTAATTAA
GTACAAGAAAACGCTGCTGGGAGATGGTCCTGTGGTGACAGATCCGAAAGCCCCCAATGTCGTTGTCACC
CGGCTCACCCTGGTTTGTGAGAGTGCCCCGGGACCAATCACCATGGACCTTACTGGAGATCTGGAAGCCC
TCAAAAAGGAAACCATTGTGTTAAAGGAAGGTTCTGAATATAGAGTCAAAATTCACTTCAAAGTGAACAG
GGATATTGTGTCAGGCCTGAAATACGTTCAGCACACCTACAGGACTGGGGTGAAAGTGGATAAAGCAACA
TTTATGGTTGGCAGCTATGGACCTCGGCCTGAGGAGTATGAGTTCCTCACTCCAGTTGAGGAGGCTCCCA
AGGGCATGCTGGCGCGAGGCACGTACCACAACAAGTCCTTCTTCACCGACGATGACAAGCAAGACCACCT
CAGCTGGGAGTGGAACCTGTCGATTAAGAAGGAGTGGACAGAATGA

Translation (201 aa):
MTEKAPEPHVEEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDGPVVTDPKAPNVVVT
RLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVNRDIVSGLKYVQHTYRTGVKVDKAT
FMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLSWEWNLSIKKEWTE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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