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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS47684.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
47684.1 |
Public |
Homo sapiens |
7 |
CDHR3 |
24 |
110 |
108 |
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Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 47684.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000317716.14 |
ENSP00000325954.9 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_152750.5 |
NP_689963.2 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_689963.2 |
885 |
Q6ZTQ4-1 |
885 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 47684.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2658 nt): ATGCAGGAAGCAATCATTCTCCTGGCTCTCCTGGGTGCCATGTCAGGGGGAGAAGCACTACACCTAATCC TCTTACCTGCTACAGGCAATGTGGCAGAGAATTCTCCACCTGGGACTTCAGTGCACAAGTTTTCTGTGAA GTTATCAGCATCATTGTCACCTGTGATCCCAGGATTTCCCCAGATAGTCAACTCAAATCCCCTCACTGAA GCTTTTAGGGTGAATTGGCTGTCAGGCACCTACTTTGAGGTTGTCACCACTGGGATGGAACAACTAGATT TTGAAACAGGACCAAACATATTTGATTTGCAGATTTATGTGAAGGATGAGGTTGGTGTCACAGACCTGCA AGTCCTGACTGTCCAGGTAACAGATGTGAACGAGCCACCTCAGTTTCAAGGCAACTTGGCAGAAGGTCTA CACCTCTACATAGTAGAAAGAGCAAACCCTGGATTCATTTACCAGGTTGAGGCCTTCGATCCAGAAGACA CAAGCCGAAACATTCCCCTCAGTTATTTCCTGATTTCTCCCCCAAAGAGCTTCAGAATGTCTGCTAATGG CACCCTCTTCTCCACAACAGAATTGGACTTTGAAGCAGGACACAGAAGTTTCCATCTCATCGTGGAGGTG AGGGACAGTGGAGGCCTCAAAGCCTCCACAGAGCTCCAGGTGAACATCGTGAACCTCAACGACGAAGTCC CTCGCTTTACCAGCCCGACACGAGTGTACACAGTCCTGGAGGAACTGAGTCCAGGAACCATCGTGGCCAA TATCACAGCGGAGGATCCTGATGATGAAGGTTTTCCCAGCCACCTCCTCTACAGCATTACCACTGTTAGC AAATATTTCATGATAAATCAGTTGACTGGTACAATCCAAGTGGCCCAAAGGATAGACCGAGATGCAGGTG AATTGAGACAAAATCCCACCATTTCCCTGGAAGTTCTAGTGAAGGACAGACCATATGGGGGTCAGGAGAA TCGCATCCAGATAACCTTCATTGTGGAAGACGTCAACGACAATCCTGCCACATGCCAAAAGTTCACCTTC AGCATTATGGTGCCGGAAAGAACAGCCAAGGGGACGTTGCTTCTTGACCTAAACAAGTTCTGCTTTGATG ATGACAGTGAGGCACCAAACAACAGATTCAACTTCACCATGCCATCTGGAGTGGGGAGCGGCAGCAGATT TTTACAGGATCCAGCTGGCTCTGGGAAGATTGTGCTGATTGGTGATCTAGACTACGAAAATCCAAGTAAC CTAGCAGCCGGCAATAAATATACGGTGATAATCCAGGTGCAGGATGTGGCCCCCCCTTACTATAAAAATA ACGTCTACGTTTATATCCTAACAAGCCCAGAAAATGAGTTTCCTCTCATTTTTGATAGGCCATCCTATGT ATTTGATGTGTCAGAAAGAAGGCCCGCCAGAACCCGAGTGGGACAGGTGCGAGCCACTGATAAAGACCTC CCCCAGAGCAGCCTCCTGTACTCCATCTCCACTGGAGGGGCCAGCCTCCAGTATCCAAATGTATTTTGGA TTAATCCCAAGACAGGAGAACTCCAGCTGGTAACTAAAGTGGACTGTGAAACAACCCCCATCTATATTCT CAGAATCCAGGCCACCAACAACGAAGACACAAGCTCTGTCACTGTTACTGTGAACATCCTTGAAGAAAAT GATGAAAAGCCAATTTGTACTCCAAACTCTTATTTCCTGGCCCTCCCAGTGGATCTGAAAGTTGGCACAA ATATTCAGAATTTCAAGCTGACATGTACCGACCTTGATTCCAGCCCCAGATCTTTCCGTTATTCCATTGG CCCAGGTAACGTCAACAATCATTTCACCTTCTCTCCCAATGCTGGTTCCAATGTCACACGCCTGCTGCTT ACATCTCGCTTTGACTATGCTGGTGGGTTTGATAAGATCTGGGACTACAAGCTACTTGTCTACGTAACTG ATGACAACTTGATGTCTGACAGGAAGAAAGCGGAGGCTCTTGTTGAGACAGGAACAGTGACACTGAGTAT TAAAGTCATTCCCCACCCAACCACTATCATCACCACGACCCCCAGGCCCAGGGTCACCTATCAGGTCCTG AGGAAAAACGTTTACTCTCCATCTGCATGGTACGTGCCGTTTGTCATCACTTTGGGCTCCATATTGCTTC TGGGTCTCCTCGTGTACCTGGTCGTCCTATTGGCCAAAGCCATCCACAGACACTGCCCCTGCAAGACTGG GAAGAACAAGGAACCTCTGACAAAGAAAGGAGAAACGAAGACTGCAGAGAGAGACGTCGTGGTGGAAACT ATCCAGATGAACACTATCTTTGATGGAGAAGCCATAGATCCAGTGACCGGGGAAACATATGAATTCAACT CAAAAACTGGAGCCAGAAAGTGGAAAGATCCACTAACCCAAATGCCAAAATGGAAAGAGTCCAGCCACCA GGGAGCTGCCCCACGCAGAGTCACTGCTGGGGAAGGGATGGGGTCACTGAGAAGTGCCAACTGGGAAGAA GATGAGCTGAGTGGCAAAGCGTGGGCTGAGGATGCTGGTCTGGGTTCCAGAAATGAGGGTGGCAAGCTGG GCAACCCAAAGAACAGAAATCCAGCCTTCATGAACAGGGCTTACCCCAAACCACACCCAGGAAAGTAA
Translation (885 aa): MQEAIILLALLGAMSGGEALHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTE AFRVNWLSGTYFEVVTTGMEQLDFETGPNIFDLQIYVKDEVGVTDLQVLTVQVTDVNEPPQFQGNLAEGL HLYIVERANPGFIYQVEAFDPEDTSRNIPLSYFLISPPKSFRMSANGTLFSTTELDFEAGHRSFHLIVEV RDSGGLKASTELQVNIVNLNDEVPRFTSPTRVYTVLEELSPGTIVANITAEDPDDEGFPSHLLYSITTVS KYFMINQLTGTIQVAQRIDRDAGELRQNPTISLEVLVKDRPYGGQENRIQITFIVEDVNDNPATCQKFTF SIMVPERTAKGTLLLDLNKFCFDDDSEAPNNRFNFTMPSGVGSGSRFLQDPAGSGKIVLIGDLDYENPSN LAAGNKYTVIIQVQDVAPPYYKNNVYVYILTSPENEFPLIFDRPSYVFDVSERRPARTRVGQVRATDKDL PQSSLLYSISTGGASLQYPNVFWINPKTGELQLVTKVDCETTPIYILRIQATNNEDTSSVTVTVNILEEN DEKPICTPNSYFLALPVDLKVGTNIQNFKLTCTDLDSSPRSFRYSIGPGNVNNHFTFSPNAGSNVTRLLL TSRFDYAGGFDKIWDYKLLVYVTDDNLMSDRKKAEALVETGTVTLSIKVIPHPTTIITTTPRPRVTYQVL RKNVYSPSAWYVPFVITLGSILLLGLLVYLVVLLAKAIHRHCPCKTGKNKEPLTKKGETKTAERDVVVET IQMNTIFDGEAIDPVTGETYEFNSKTGARKWKDPLTQMPKWKESSHQGAAPRRVTAGEGMGSLRSANWEE DELSGKAWAEDAGLGSRNEGGKLGNPKNRNPAFMNRAYPKPHPGK
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