NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14702.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14702.1 Public Homo sapiens X MAGEA4 24 110 108 CCDS HistoryNCBI Gene:4103Re-query CCDS DB by CCDS ID:14702.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14702.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276344.6 ENSP00000276344.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276344.6Link to Ensembl Protein Viewer:ENSP00000276344.2Re-query CCDS DB by Nucleotide ID:ENST00000276344Re-query CCDS DB by Protein ID:ENSP00000276344
Original member Current member EBI ENST00000360243.6 ENSP00000353379.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360243.6Link to Ensembl Protein Viewer:ENSP00000353379.2Re-query CCDS DB by Nucleotide ID:ENST00000360243Re-query CCDS DB by Protein ID:ENSP00000353379
Original member Current member EBI ENST00000370335.5 ENSP00000359360.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370335.5Link to Ensembl Protein Viewer:ENSP00000359360.1Re-query CCDS DB by Nucleotide ID:ENST00000370335Re-query CCDS DB by Protein ID:ENSP00000359360
Original member Current member EBI ENST00000370340.7 ENSP00000359365.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370340.7Link to Ensembl Protein Viewer:ENSP00000359365.3Re-query CCDS DB by Nucleotide ID:ENST00000370340Re-query CCDS DB by Protein ID:ENSP00000359365
Original member Current member EBI ENST00000393920.6 ENSP00000377497.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393920.6Link to Ensembl Protein Viewer:ENSP00000377497.1Re-query CCDS DB by Nucleotide ID:ENST00000393920Re-query CCDS DB by Protein ID:ENSP00000377497
Original member Current member EBI ENST00000393921.6 ENSP00000377498.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393921.6Link to Ensembl Protein Viewer:ENSP00000377498.1Re-query CCDS DB by Nucleotide ID:ENST00000393921Re-query CCDS DB by Protein ID:ENSP00000377498
Original member Current member EBI ENST00000430273.6 ENSP00000394149.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000430273.6Link to Ensembl Protein Viewer:ENSP00000394149.2Re-query CCDS DB by Nucleotide ID:ENST00000430273Re-query CCDS DB by Protein ID:ENSP00000394149
Original member Current member EBI ENST00000457310.6 ENSP00000402186.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457310.6Link to Ensembl Protein Viewer:ENSP00000402186.2Re-query CCDS DB by Nucleotide ID:ENST00000457310Re-query CCDS DB by Protein ID:ENSP00000402186
Original member Current member EBI ENST00000682265.1 ENSP00000506838.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682265.1Link to Ensembl Protein Viewer:ENSP00000506838.1Re-query CCDS DB by Nucleotide ID:ENST00000682265Re-query CCDS DB by Protein ID:ENSP00000506838
Original member Current member EBI ENST00000684668.1 ENSP00000507023.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684668.1Link to Ensembl Protein Viewer:ENSP00000507023.1Re-query CCDS DB by Nucleotide ID:ENST00000684668Re-query CCDS DB by Protein ID:ENSP00000507023
Original member Current member NCBI NM_001011548.1 NP_001011548.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001011548.1Link to Protein Sequence:NP_001011548.1Re-query CCDS DB by Nucleotide ID:NM_001011548Re-query CCDS DB by Protein ID:NP_001011548Link to BLAST:NP_001011548.1
Original member Current member NCBI NM_001011549.1 NP_001011549.1 Accepted alive Link to Nucleotide Sequence:NM_001011549.1Link to Protein Sequence:NP_001011549.1Re-query CCDS DB by Nucleotide ID:NM_001011549Re-query CCDS DB by Protein ID:NP_001011549Link to BLAST:NP_001011549.1
Original member Current member NCBI NM_001011550.1 NP_001011550.1 Accepted alive Link to Nucleotide Sequence:NM_001011550.1Link to Protein Sequence:NP_001011550.1Re-query CCDS DB by Nucleotide ID:NM_001011550Re-query CCDS DB by Protein ID:NP_001011550Link to BLAST:NP_001011550.1
Original member Current member NCBI NM_001386196.1 NP_001373125.1 Accepted alive Link to Nucleotide Sequence:NM_001386196.1Link to Protein Sequence:NP_001373125.1Re-query CCDS DB by Nucleotide ID:NM_001386196Re-query CCDS DB by Protein ID:NP_001373125Link to BLAST:NP_001373125.1
Original member Current member NCBI NM_001386197.1 NP_001373126.1 Accepted alive Link to Nucleotide Sequence:NM_001386197.1Link to Protein Sequence:NP_001373126.1Re-query CCDS DB by Nucleotide ID:NM_001386197Re-query CCDS DB by Protein ID:NP_001373126Link to BLAST:NP_001373126.1
Original member Current member NCBI NM_001386198.1 NP_001373127.1 Accepted alive Link to Nucleotide Sequence:NM_001386198.1Link to Protein Sequence:NP_001373127.1Re-query CCDS DB by Nucleotide ID:NM_001386198Re-query CCDS DB by Protein ID:NP_001373127Link to BLAST:NP_001373127.1
Original member Current member NCBI NM_001386199.1 NP_001373128.1 Accepted alive Link to Nucleotide Sequence:NM_001386199.1Link to Protein Sequence:NP_001373128.1Re-query CCDS DB by Nucleotide ID:NM_001386199Re-query CCDS DB by Protein ID:NP_001373128Link to BLAST:NP_001373128.1
Original member Current member NCBI NM_001386200.1 NP_001373129.1 Accepted alive Link to Nucleotide Sequence:NM_001386200.1Link to Protein Sequence:NP_001373129.1Re-query CCDS DB by Nucleotide ID:NM_001386200Re-query CCDS DB by Protein ID:NP_001373129Link to BLAST:NP_001373129.1
Original member Current member NCBI NM_001386202.1 NP_001373131.1 Accepted alive Link to Nucleotide Sequence:NM_001386202.1Link to Protein Sequence:NP_001373131.1Re-query CCDS DB by Nucleotide ID:NM_001386202Re-query CCDS DB by Protein ID:NP_001373131Link to BLAST:NP_001373131.1
Original member Current member NCBI NM_001386203.1 NP_001373132.1 Accepted alive Link to Nucleotide Sequence:NM_001386203.1Link to Protein Sequence:NP_001373132.1Re-query CCDS DB by Nucleotide ID:NM_001386203Re-query CCDS DB by Protein ID:NP_001373132Link to BLAST:NP_001373132.1
Original member Current member NCBI NM_002362.4 NP_002353.3 Accepted alive Link to Nucleotide Sequence:NM_002362.4Link to Protein Sequence:NP_002353.3Re-query CCDS DB by Nucleotide ID:NM_002362Re-query CCDS DB by Protein ID:NP_002353Link to BLAST:NP_002353.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011548.1 317 P43358 317 100% 0 0
NP_001011549.1 317 P43358 317 100% 0 0
NP_001011550.1 317 P43358 317 100% 0 0
NP_001373125.1 317 P43358 317 100% 0 0
NP_001373126.1 317 P43358 317 100% 0 0
NP_001373127.1 317 P43358 317 100% 0 0
NP_001373128.1 317 P43358 317 100% 0 0
NP_001373129.1 317 P43358 317 100% 0 0
NP_001373131.1 317 P43358 317 100% 0 0
NP_001373132.1 317 P43358 317 100% 0 0
NP_002353.3 317 P43358 317 100% 0 0

Chromosomal Locations for CCDS 14702.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 151923665 151924618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGTCTTCTGAGCAGAAGAGTCAGCACTGCAAGCCTGAGGAAGGCGTTGAGGCCCAAGAAGAGGCCCTGG
GCCTGGTGGGTGCACAGGCTCCTACTACTGAGGAGCAGGAGGCTGCTGTCTCCTCCTCCTCTCCTCTGGT
CCCTGGCACCCTGGAGGAAGTGCCTGCTGCTGAGTCAGCAGGTCCTCCCCAGAGTCCTCAGGGAGCCTCT
GCCTTACCCACTACCATCAGCTTCACTTGCTGGAGGCAACCCAATGAGGGTTCCAGCAGCCAAGAAGAGG
AGGGGCCAAGCACCTCGCCTGACGCAGAGTCCTTGTTCCGAGAAGCACTCAGTAACAAGGTGGATGAGTT
GGCTCATTTTCTGCTCCGCAAGTATCGAGCCAAGGAGCTGGTCACAAAGGCAGAAATGCTGGAGAGAGTC
ATCAAAAATTACAAGCGCTGCTTTCCTGTGATCTTCGGCAAAGCCTCCGAGTCCCTGAAGATGATCTTTG
GCATTGACGTGAAGGAAGTGGACCCCGCCAGCAACACCTACACCCTTGTCACCTGCCTGGGCCTTTCCTA
TGATGGCCTGCTGGGTAATAATCAGATCTTTCCCAAGACAGGCCTTCTGATAATCGTCCTGGGCACAATT
GCAATGGAGGGCGACAGCGCCTCTGAGGAGGAAATCTGGGAGGAGCTGGGTGTGATGGGGGTGTATGATG
GGAGGGAGCACACTGTCTATGGGGAGCCCAGGAAACTGCTCACCCAAGATTGGGTGCAGGAAAACTACCT
GGAGTACCGGCAGGTACCCGGCAGTAATCCTGCGCGCTATGAGTTCCTGTGGGGTCCAAGGGCTCTGGCT
GAAACCAGCTATGTGAAAGTCCTGGAGCATGTGGTCAGGGTCAATGCAAGAGTTCGCATTGCCTACCCAT
CCCTGCGTGAAGCAGCTTTGTTAGAGGAGGAAGAGGGAGTCTGA

Translation (317 aa):
MSSEQKSQHCKPEEGVEAQEEALGLVGAQAPTTEEQEAAVSSSSPLVPGTLEEVPAAESAGPPQSPQGAS
ALPTTISFTCWRQPNEGSSSQEEEGPSTSPDAESLFREALSNKVDELAHFLLRKYRAKELVTKAEMLERV
IKNYKRCFPVIFGKASESLKMIFGIDVKEVDPASNTYTLVTCLGLSYDGLLGNNQIFPKTGLLIIVLGTI
AMEGDSASEEEIWEELGVMGVYDGREHTVYGEPRKLLTQDWVQENYLEYRQVPGSNPARYEFLWGPRALA
ETSYVKVLEHVVRVNARVRIAYPSLREAALLEEEEGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH