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Report for CCDS28351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28351.1 Public Mus musculus 16 Kcnj15 23 108 98 CCDS HistoryNCBI Gene:16516Re-query CCDS DB by CCDS ID:28351.1Re-query CCDS DB by GeneID:16516See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28351.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037154.13 ENSMUSP00000045218.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037154.13Link to Ensembl Protein Viewer:ENSMUSP00000045218.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000037154Re-query CCDS DB by Protein ID:ENSMUSP00000045218
Original member Current member EBI ENSMUST00000113859.7 ENSMUSP00000109490.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113859.7Link to Ensembl Protein Viewer:ENSMUSP00000109490.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113859Re-query CCDS DB by Protein ID:ENSMUSP00000109490
Original member Current member EBI ENSMUST00000113861.7 ENSMUSP00000109492.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113861.7Link to Ensembl Protein Viewer:ENSMUSP00000109492.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113861Re-query CCDS DB by Protein ID:ENSMUSP00000109492
Original member Current member EBI ENSMUST00000113862.7 ENSMUSP00000109493.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113862.7Link to Ensembl Protein Viewer:ENSMUSP00000109493.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113862Re-query CCDS DB by Protein ID:ENSMUSP00000109493
Original member Current member NCBI NM_001039057.2 NP_001034146.1 Accepted alive Link to Nucleotide Sequence:NM_001039057.2Link to Protein Sequence:NP_001034146.1Re-query CCDS DB by Nucleotide ID:NM_001039057Re-query CCDS DB by Protein ID:NP_001034146Link to BLAST:NP_001034146.1
Original member Current member NCBI NM_001271687.1 NP_001258616.1 Accepted alive Link to Nucleotide Sequence:NM_001271687.1Link to Protein Sequence:NP_001258616.1Re-query CCDS DB by Nucleotide ID:NM_001271687Re-query CCDS DB by Protein ID:NP_001258616Link to BLAST:NP_001258616.1
Original member Current member NCBI NM_001271690.1 NP_001258619.1 Accepted alive Link to Nucleotide Sequence:NM_001271690.1Link to Protein Sequence:NP_001258619.1Re-query CCDS DB by Nucleotide ID:NM_001271690Re-query CCDS DB by Protein ID:NP_001258619Link to BLAST:NP_001258619.1
Original member Current member NCBI NM_001271692.1 NP_001258621.1 Accepted alive Link to Nucleotide Sequence:NM_001271692.1Link to Protein Sequence:NP_001258621.1Re-query CCDS DB by Nucleotide ID:NM_001271692Re-query CCDS DB by Protein ID:NP_001258621Link to BLAST:NP_001258621.1
Original member Current member NCBI NM_001271694.1 NP_001258623.1 Accepted alive Link to Nucleotide Sequence:NM_001271694.1Link to Protein Sequence:NP_001258623.1Re-query CCDS DB by Nucleotide ID:NM_001271694Re-query CCDS DB by Protein ID:NP_001258623Link to BLAST:NP_001258623.1

Chromosomal Locations for CCDS 28351.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 95291827 95291896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 95295591 95296729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGGTAGCCAGGTGGGAGAAGGGGAGCGAGGACGCGCCACTTACCCTGCAGAAGATTCCTGACCTACAGA
GTGGTCCAAAGATGGATGCCATTCACCTTGGCATGTCCAGTGCCCCACTGGTGAAGCATACCAACGGGGT
TGGACTCAAGGCCCACAGACCCCGAGTCATGTCAAAGAGTGGGCACAGTAATGTGAGAATCGATAAGGTA
GACGGAATCTATTTACTCTACCTCCAGGACTTGTGGACAACCGTCATCGACATGAAGTGGCGATACAAGC
TCACCCTATTTGCTGCCACCTTTGTGATGACCTGGTTTCTGTTTGGAGTGGTCTACTATGCCATAGCCTT
TATTCATGGTGACTTACAACTTGGGGAATCTAATTCCAACCACACACCCTGCATTATGAAAGTGGACTCT
CTCACAGGAGCATTCCTCTTTTCCTTGGAATCTCAGACAACCATTGGCTACGGGGTCCGTTCCATCACAG
AGGAGTGTCCCCATGCTATCTTCCTCTTAGTCGCCCAACTGGTCATCACCACATTGATTGAGATCTTCAT
TACGGGGACCTTTCTGGCTAAAATTGCAAGACCCAAAAAGCGAGCCGAGACCATTAAGTTCAGCCACTGT
GCTGTCATCAGCAAGCAGAATGGAAAGCTATGCCTGGTCATCCAGGTGGCCAACATGAGGAAGAGTCTCC
TGATTCAGTGCCAGCTCTCTGGAAAACTCCTGCAGACACACGTCACCAAAGAGGGAGAACGCATTCTCCT
CAACCAGGCCACTGTCAAATTCCACGTGGACTCCTCTTCCGAGAGTCCCTTCCTCATCCTGCCCATGACC
TTCTACCACGTGTTGGATGAGACAAGCCCCCTGCGGGACCTCACACCCCAAAACCTAAAGGAGAAGGAGT
TTGAGCTGGTGGTACTTCTCAACGCCACGGTGGAGTCTACCAGCGCCGTCTGCCAGAGCCGAACGTCTTA
CATCCCGGAGGAGATCTACTGGGGCTTTGAGTTTGTGCCTGTGGTTTCTCTCTCCAAAAATGGAAAGTAT
GTGGCTGATTTCAGTCAATTTGAGCAGATCAGGAAGAGCCCGGATTGTACCTTCTACTGTGCCGATTCTG
AGAAGCAGAAGCTTGAAGAACAGTACAGGCAAGAGGACCAGAGGGAGCGGGAGCTGAGGAGCCTCCTGCT
ACAGCAGAGCAATGTCTGA

Translation (402 aa):
MVARWEKGSEDAPLTLQKIPDLQSGPKMDAIHLGMSSAPLVKHTNGVGLKAHRPRVMSKSGHSNVRIDKV
DGIYLLYLQDLWTTVIDMKWRYKLTLFAATFVMTWFLFGVVYYAIAFIHGDLQLGESNSNHTPCIMKVDS
LTGAFLFSLESQTTIGYGVRSITEECPHAIFLLVAQLVITTLIEIFITGTFLAKIARPKKRAETIKFSHC
AVISKQNGKLCLVIQVANMRKSLLIQCQLSGKLLQTHVTKEGERILLNQATVKFHVDSSSESPFLILPMT
FYHVLDETSPLRDLTPQNLKEKEFELVVLLNATVESTSAVCQSRTSYIPEEIYWGFEFVPVVSLSKNGKY
VADFSQFEQIRKSPDCTFYCADSEKQKLEEQYRQEDQRERELRSLLLQQSNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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