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Report for CCDS34970.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34970.1 Public Homo sapiens 8 C8orf82 24 110 108 CCDS HistoryNCBI Gene:414919Re-query CCDS DB by CCDS ID:34970.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34970.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534680.5 ENSP00000434593.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534680.5Link to Ensembl Protein Viewer:ENSP00000434593.1Re-query CCDS DB by Nucleotide ID:ENST00000534680Re-query CCDS DB by Protein ID:ENSP00000434593
Original member Current member EBI ENST00000524821.6 ENSP00000436621.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000524821.6Link to Ensembl Protein Viewer:ENSP00000436621.1Re-query CCDS DB by Nucleotide ID:ENST00000524821Re-query CCDS DB by Protein ID:ENSP00000436621
Original member Current member NCBI NM_001001795.2 NP_001001795.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001795.2Link to Protein Sequence:NP_001001795.1Re-query CCDS DB by Nucleotide ID:NM_001001795Re-query CCDS DB by Protein ID:NP_001001795Link to BLAST:NP_001001795.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001795.1 216 Q6P1X6-1 216 100% 0 0

Chromosomal Locations for CCDS 34970.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144527342 144527787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144528024 144528072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144528761 144528916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGTGGCCGCCTTGCGGGACGCTCCGGACCCTGGCCTTGGCGCGGTCGCGGGGAGCCCGGGCCTGCAGCG
GGGATGGGGGCGTTTCCTACACGCAGGGCCAGAGTCCGGAGCCGCGGACCCGCGAGTATTTCTACTACGT
GGACCACCAGGGCCAGCTTTTCCTGGATGATTCCAAAATGAAGAATTTCATCACCTGCTTCAAAGACCCG
CAGTTCCTGGTCACCTTCTTCTCCCGCCTGAGACCCAACCGCAGCGGGCGCTACGAGGCCGCTTTCCCCT
TCCTCTCGCCCTGCGGCAGAGAGCGCAACTTCCTGCGCTGCGAGGACCGGCCGGTGGTCTTCACGCACCT
GCTGACCGCGGACCACGGGCCTCCGCGCCTCTCCTACTGCGGCGGTGGCGAGGCCCTGGCCGTGCCCTTC
GAGCCGGCGCGCCTGCTGCCCCTGGCCGCCAACGGGCGCCTGTACCACCCGGCGCCGGAGCGTGCGGGCG
GCGTGGGCCTGGTGCGCTCCGCCCTGGCCTTCGAGCTCAGCGCCTGCTTCGAGTACGGGCCCGGCGCGCC
TGCGCTGCCCTCGCACGTGCGCTGGCAGGGCCGCCGCCTCGCCCTCACCATGGACCTGGCCCCGCTGCTG
CTCGCGGCTCGGTCGCCCTGA

Translation (216 aa):
MWPPCGTLRTLALARSRGARACSGDGGVSYTQGQSPEPRTREYFYYVDHQGQLFLDDSKMKNFITCFKDP
QFLVTFFSRLRPNRSGRYEAAFPFLSPCGRERNFLRCEDRPVVFTHLLTADHGPPRLSYCGGGEALAVPF
EPARLLPLAANGRLYHPAPERAGGVGLVRSALAFELSACFEYGPGAPALPSHVRWQGRRLALTMDLAPLL
LAARSP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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