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Report for CCDS2152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2152.1 Public Homo sapiens 2 AMMECR1L 24 110 108 CCDS HistoryNCBI Gene:83607Re-query CCDS DB by CCDS ID:2152.1Re-query CCDS DB by GeneID:83607See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272647.10 ENSP00000272647.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272647.10Link to Ensembl Protein Viewer:ENSP00000272647.6Re-query CCDS DB by Nucleotide ID:ENST00000272647Re-query CCDS DB by Protein ID:ENSP00000272647
Original member Current member EBI ENST00000393001.1 ENSP00000376726.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393001.1Link to Ensembl Protein Viewer:ENSP00000376726.1Re-query CCDS DB by Nucleotide ID:ENST00000393001Re-query CCDS DB by Protein ID:ENSP00000376726
Original member Current member NCBI NM_001199140.2 NP_001186069.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001199140.2Link to Protein Sequence:NP_001186069.1Re-query CCDS DB by Nucleotide ID:NM_001199140Re-query CCDS DB by Protein ID:NP_001186069Link to BLAST:NP_001186069.1
Original member Current member NCBI NM_031445.2 NP_113633.2 Accepted alive Link to Nucleotide Sequence:NM_031445.2Link to Protein Sequence:NP_113633.2Re-query CCDS DB by Nucleotide ID:NM_031445Re-query CCDS DB by Protein ID:NP_113633Link to BLAST:NP_113633.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186069.1 310 Q6DCA0 310 100% 0 0
NP_113633.2 310 Q6DCA0 310 100% 0 0

Chromosomal Locations for CCDS 2152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 127865094 127865205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127866900 127866996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127869454 127869544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127870814 127870928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127871249 127871359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 127873828 127874234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGGAAAAAGACGTTGTGTTCCTCCACTCGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGC
CCAAATTATCTGGAAGTGGAACGCACAGTCACGGGAATCAGTCCACAACTGTCCCCGGCTCTAGTTCAGG
ACCTCTTCAAAACCACCAGCATGTGGACAGCAGCAGTGGACGGGAGAATGTGTCAGACTTAACTCTGGGA
CCTGGAAACTCTCCCATCACACGAATGAATCCCGCATCGGGAGCGCTGAGCCCTCTTCCCCGGCCTAATG
GAACTGCCAACACCACTAAGAATCTGGTGGTGACTGCAGAGATGTGCTGCTACTGCTTCGACGTACTCTA
CTGTCACCTCTATGGCTTCCCACAGCCACGACTTCCTAGATTCACCAATGACCCCTATCCGCTCTTTGTG
ACGTGGAAGACAGGGCGGGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATGAATCTTCATT
CAGGACTCAGGGAATACACGTTAACCAGTGCACTTAAGGACAGCCGATTTCCCCCCCTGACCCGAGAGGA
GCTGCCTAAACTTTTCTGCTCTGTCTCCCTCCTTACTAACTTTGAGGATGCCAGTGATTACCTGGACTGG
GAGGTAGGGGTCCATGGGATTCGAATTGAATTCATTAATGAAAAAGGTGTCAAACGCACAGCCACATATT
TACCTGAGGTTGCTAAGGAACAAGACTGGGATCAGATCCAGACAATAGACTCCTTGCTCAGGAAAGGTGG
CTTTAAAGCTCCAATTACCAGTGAATTCAGAAAAACGATCAAACTCACCAGGTACCGAAGTGAGAAGGTG
ACAATCAGTTACGCAGAGTATATTGCTTCCCGACAGCACTGTTTCCAGAACGGCACTCTTCATGCCCCGC
CCCTCTACAATCATTACTCCTGA

Translation (310 aa):
MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSGRENVSDLTLG
PGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFV
TWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDW
EVGVHGIRIEFINEKGVKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKTIKLTRYRSEKV
TISYAEYIASRQHCFQNGTLHAPPLYNHYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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