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Report for CCDS42998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42998.1 Public Homo sapiens 22 MN1 24 110 108 CCDS HistoryNCBI Gene:4330Re-query CCDS DB by CCDS ID:42998.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42998.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302326.5 ENSP00000304956.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302326.5Link to Ensembl Protein Viewer:ENSP00000304956.4Re-query CCDS DB by Nucleotide ID:ENST00000302326Re-query CCDS DB by Protein ID:ENSP00000304956
Original member Current member NCBI NM_002430.3 NP_002421.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002430.3Link to Protein Sequence:NP_002421.3Re-query CCDS DB by Nucleotide ID:NM_002430Re-query CCDS DB by Protein ID:NP_002421Link to BLAST:NP_002421.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002421.3 1320 Q10571 1320 100% 0 0

Chromosomal Locations for CCDS 42998.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 27750915 27751096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 27796763 27800543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3963 nt):
ATGTTTGGGCTGGACCAATTCGAGCCCCAGGTCAACAGCAGGAACGCTGGCCAGGGCGAGAGGAACTTTA
ACGAGACCGGACTGAGCATGAACACCCACTTTAAGGCCCCGGCTTTCCACACTGGGGGGCCCCCTGGCCC
TGTGGATCCTGCTATGAGCGCGCTGGGCGAACCCCCGATCTTGGGCATGAACATGGAGCCCTACGGCTTC
CACGCGCGCGGCCACTCGGAGTTGCACGCAGGGGGGCTGCAAGCGCAGCCTGTGCACGGCTTCTTTGGCG
GCCAGCAGCCTCACCACGGCCACCCGGGAAGTCATCATCCCCACCAGCATCACCCCCACTTTGGGGGCAA
CTTCGGTGGCCCGGACCCCGGGGCCTCGTGCCTGCACGGGGGTCGCCTGCTCGGCTACGGCGGCGCAGCC
GGAGGCCTGGGCAGCCAGCCGCCCTTCGCCGAGGGCTATGAGCACATGGCGGAGAGCCAGGGGCCTGAGA
GCTTCGGCCCGCAGCGACCGGGGAACCTCCCGGACTTCCACAGTTCAGGTGCCTCCAGCCACGCCGTGCC
GGCCCCATGCCTGCCGCTGGACCAGAGCCCTAACCGAGCCGCCTCCTTCCACGGCCTGCCGTCCTCCAGC
GGCTCCGATTCCCACAGTCTGGAGCCACGGAGGGTGACGAACCAAGGAGCCGTCGACTCGCTGGAATACA
ATTACCCGGGCGAGGCGCCCTCGGGACATTTTGACATGTTTTCGCCCTCTGACTCCGAAGGGCAGCTGCC
TCATTATGCAGCGGGTCGCCAGGTTCCTGGGGGCGCTTTCCCGGGCGCCTCGGCCATGCCCAGAGCTGCG
GGCATGGTGGGCTTGTCCAAAATGCACGCCCAGCCACCGCAGCAGCAGCCCCAGCAGCAGCAGCAGCCCC
AGCAGCAGCAGCAGCAGCATGGTGTGTTCTTTGAGAGGTTCAGTGGGGCCAGAAAGATGCCTGTGGGTCT
GGAGCCCTCAGTGGGCTCCAGGCACCCGTTAATGCAGCCTCCCCAGCAGGCCCCGCCACCCCCTCAGCAG
CAGCCCCCGCAGCAGCCGCCACAGCAGCAGCCGCCGCCGCCACCCGGGCTTCTAGTCCGACAAAATTCGT
GCCCGCCTGCGCTCCCTCGGCCCCAGCAGGGCGAGGCGGGCACGCCCAGCGGCGGCCTGCAGGACGGAGG
CCCCATGCTGCCCAGCCAGCACGCGCAATTCGAGTATCCCATCCACCGGCTGGAGAACCGGAGCATGCAC
CCTTATTCCGAGCCTGTTTTCAGCATGCAGCATCCTCCTCCGCAGCAGGCGCCCAACCAGCGGCTGCAGC
ATTTCGACGCGCCCCCCTACATGAACGTGGCCAAGAGGCCGCGCTTCGACTTTCCGGGCAGCGCGGGAGT
GGACCGCTGCGCTTCGTGGAACGGCAGCATGCACAACGGCGCTCTGGATAATCACCTCTCCCCTTCCGCC
TACCCAGGCCTACCCGGCGAGTTCACACCGCCTGTGCCCGACAGCTTCCCTTCGGGGCCGCCCCTGCAGC
ATCCGGCCCCGGACCACCAGTCCCTGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCA
GCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCGCCAAAACGCGGCCCTCATGATTAAGCAG
ATGGCGTCGCGGAATCAGCAGCAGCGGCTGCGCCAGCCCAACCTGGCTCAGCTAGGCCACCCCGGGGACG
TGGGCCAGGGCGGCCTGGTGCATGGCGGCCCGGTGGGCGGCTTGGCCCAGCCGAACTTTGAGCGCGAAGG
CGGCAGCACGGGCGCCGGGCGTCTGGGCACCTTCGAGCAGCAGGCGCCGCACTTGGCGCAAGAGAGCGCG
TGGTTCTCAGGTCCGCATCCGCCGCCCGGAGACCTGCTGCCCCGTAGGATGGGCGGCTCGGGTCTGCCCG
CTGACTGTGGCCCGCACGACCCCAGCCTGGCGCCCCCTCCTCCGCCTGGTGGCTCGGGGGTGCTGTTCCG
GGGCCCTCTGCAGGAGCCGATGAGGATGCCCGGAGAGGGCCACGTGCCCGCGCTGCCTTCACCGGGCCTG
CAGTTCGGGGGCAGTCTGGGAGGCCTGGGTCAGCTGCAGTCGCCCGGGGCGGGCGTGGGGCTCCCCAGCG
CTGCTTCGGAGCGCCGGCCCCCGCCGCCGGACTTTGCTACGTCTGCGCTCGGGGGCCAGCCGGGCTTTCC
GTTTGGTGCAGCCGGCCGGCAGTCCACGCCGCACAGCGGTCCAGGCGTGAACTCGCCCCCCAGCGCGGGA
GGGGGCGGTGGCAGCTCTGGTGGCGGCGGTGGCGGGGGTGCCTACCCGCCGCAGCCTGATTTCCAGCCCA
GCCAGCGCACCTCGGCCAGTAAATTGGGCGCGCTCTCGCTGGGCTCCTTCAACAAGCCCAGCTCCAAGGA
CAACCTGTTCGGCCAGAGCTGCCTGGCTGCGCTCTCCACCGCTTGCCAGAACATGATCGCCAGCCTCGGG
GCCCCCAACCTCAACGTGACCTTCAACAAGAAGAACCCGCCAGAGGGCAAGAGGAAACTGAGCCAGAACG
AGACCGACGGCGCGGCAGTGGCCGGCAACCCGGGCTCGGATTACTTCCCAGGAGGGACTGCTCCTGGGGC
CCCAGGACCCGGAGGCCCGTCCGGGACCAGTAGCAGCGGCTCCAAAGCCTCGGGGCCGCCCAACCCTCCA
GCCCAGGGGGACGGCACCAGCCTCTCCCCCAACTACACCCTGGAATCCACGTCGGGGAATGACGGCAAGC
CGGTCTCCGGGGGCGGCGGCCGGGGACGGGGTCGCAGAAAAAGGGACAGTGGTCACGTGAGCCCTGGCAC
CTTCTTTGACAAGTACTCGGCGGCTCCGGACAGCGGGGGCGCACCTGGGGTGAGCCCAGGGCAGCAGCAA
GCGTCAGGCGCAGCCGTCGGGGGAAGCTCCGCAGGCGAGACGCGCGGGGCACCGACGCCCCACGAAAAGG
CGCTCACGTCGCCATCCTGGGGGAAGGGGGCTGAGTTGCTCCTGGGGGATCAGCCGGACCTCATTGGGTC
CCTGGACGGCGGGGCCAAGTCGGACAGTAGTTCGCCAAACGTGGGTGAGTTCGCCTCGGACGAGGTGAGC
ACGAGCTACGCCAATGAGGACGAGGTGTCGTCCAGCTCTGACAACCCCCAGGCACTAGTTAAAGCGAGCA
GGAGTCCCCTGGTGACCGGCTCGCCCAAACTCCCTCCCCGTGGGGTAGGCGCCGGGGAACACGGACCGAA
GGCGCCCCCGCCCGCCCTCGGCCTGGGCATCATGTCTAACTCTACCTCGACCCCTGACAGCTACGGCGGC
GGTGGGGGCCCGGGCCATCCGGGCACTCCGGGCCTGGAGCAGGTCCGCACCCCGACGAGCAGCAGCGGCG
CCCCGCCACCCGACGAGATCCACCCCCTGGAGATCCTTCAGGCGCAGATCCAGCTACAGAGGCAGCAGTT
CAGCATCTCCGAGGACCAGCCTCTGGGGCTGAAGGGTGGCAAGAAGGGTGAGTGCGCCGTCGGGGCCTCA
GGGGCGCAGAATGGCGACAGCGAGCTGGGCAGCTGCTGCTCCGAGGCGGTCAAGAGCGCCATGAGCACCA
TTGACCTGGACTCGCTGATGGCAGAGCACAGCGCTGCCTGGTACATGCCCGCTGACAAGGCCCTGGTGGA
CAGCGCGGACGACGACAAGACGTTGGCGCCCTGGGAGAAGGCCAAACCCCAGAACCCCAACAGCAAAGAA
GCCCACGACCTCCCTGCAAACAAGGCCTCAGCATCCCAGCCTGGCAGCCACTTGCAGTGCCTGTCTGTCC
ACTGCACAGACGACGTGGGTGACGCCAAGGCTCGAGCCTCCGTGCCCACCTGGCGGTCCCTGCATTCTGA
CATCTCCAACAGATTTGGGACATTCGTGGCTGCCCTAACTTGA

Translation (1320 aa):
MFGLDQFEPQVNSRNAGQGERNFNETGLSMNTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGF
HARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAA
GGLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSS
GSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAA
GMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQ
QPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMH
PYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSA
YPGLPGEFTPPVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQ
MASRNQQQRLRQPNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA
WFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALPSPGL
QFGGSLGGLGQLQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFPFGAAGRQSTPHSGPGVNSPPSAG
GGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALSTACQNMIASLG
APNLNVTFNKKNPPEGKRKLSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPP
AQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQ
ASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEFASDEVS
TSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPALGLGIMSNSTSTPDSYGG
GGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQLQRQQFSISEDQPLGLKGGKKGECAVGAS
GAQNGDSELGSCCSEAVKSAMSTIDLDSLMAEHSAAWYMPADKALVDSADDDKTLAPWEKAKPQNPNSKE
AHDLPANKASASQPGSHLQCLSVHCTDDVGDAKARASVPTWRSLHSDISNRFGTFVAALT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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