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Report for CCDS53059.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53059.1 Public Mus musculus X Rhox2g 23 108 98 CCDS HistoryNCBI Gene:434766Re-query CCDS DB by CCDS ID:53059.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53059.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115169.3 ENSMUSP00000110823.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115169.3Link to Ensembl Protein Viewer:ENSMUSP00000110823.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000115169Re-query CCDS DB by Protein ID:ENSMUSP00000110823
Original member Current member NCBI NM_001114153.1 NP_001107625.1 Accepted alive Link to Nucleotide Sequence:NM_001114153.1Link to Protein Sequence:NP_001107625.1Re-query CCDS DB by Nucleotide ID:NM_001114153Re-query CCDS DB by Protein ID:NP_001107625Link to BLAST:NP_001107625.1

Chromosomal Locations for CCDS 53059.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 37639292 37639342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37641157 37641202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37642786 37643197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 37643360 37643426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGAGCGACAAAGCATCAATTACAAGCTTGATGTGGGACCTGAGGAGGATGAGGAAAATGCGAATGGTA
TAAAGACTCTGATGGTGTTGCTGGCTGGAGAGGGAAGAAACGAGGGAGAGAGTGGACGGGGCCTGCCTGG
GTCGGGAGTCTCAGCAGCGGAAGGATACAGAGCAGGAGAATTAAGTGCAGGTGGGCTTGCTGCGCCAGTA
GCCGACCTCATGGATAACAACAACCAAGAGGACCTTGGTGCCACTGGCTGTGCCCAGGAGAAGGAGAAGC
AGCCAGAGGAGCCAGTCCCTGATTCCATGGGGGATTTGGAAAATGTAAAGCCTATGTCAGGGCCGTGGTC
CACTGTTAATCCTGTGAGAGTGTTGGTGCCTGAATTCCTTCACGGTTGGCAACAGAGCTTCAATGTGCTG
CAACTACAAGAGCTGGAGAGCATCTTCCAGTGCAATCACTACATCAGCACTACAGAGGCAAAGTGTCTGG
CAAGATCCATGGGTGTGAGTAAAGCCACAGTGCAGGAATGGTTTTTGAAGAGGAGAGAGAAATACAGGAG
TTATAAGAGGCTGTAA

Translation (191 aa):
MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPV
ADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVL
QLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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