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Report for CCDS30261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30261.1 Public Mus musculus X Mageb4 23 108 98 CCDS HistoryNCBI Gene:434903Re-query CCDS DB by CCDS ID:30261.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30261.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096378.2 ENSMUSP00000094107.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096378.2Link to Ensembl Protein Viewer:ENSMUSP00000094107.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000096378Re-query CCDS DB by Protein ID:ENSMUSP00000094107
Original member Current member EBI ENSMUST00000113969.9 ENSMUSP00000109602.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113969.9Link to Ensembl Protein Viewer:ENSMUSP00000109602.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000113969Re-query CCDS DB by Protein ID:ENSMUSP00000109602
Original member Current member NCBI NM_001033492.2 NP_001028664.2 Accepted alive Link to Nucleotide Sequence:NM_001033492.2Link to Protein Sequence:NP_001028664.2Re-query CCDS DB by Nucleotide ID:NM_001033492Re-query CCDS DB by Protein ID:NP_001028664Link to BLAST:NP_001028664.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028664.2 556 A2A9R3 556 100% 0 0

Chromosomal Locations for CCDS 30261.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 86250751 86252421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGCCCAGGGGACAAAAGAGTAAGGCCCGTGCTCGTGAGAAGCGTCGCCTGGTCCAGGATGAGGCCCAGG
AG
CTCCAGGATGCTCAAGCCAAGGCAGGAGAGAAAGGAAAGTCCCCCTCCTGCTCTAATCAGGATTCTGG
A
GATGCTGTTGCAAGCACCTCTACTGCTGGCTTCCCTCAAAAGTCTAAATCTCAAGGTGAGGCACCCACC
ACC
ACTGCTAGGAAAGGTGGTGCCTGCAGAAGATCTCGTAAAAGTACCAGAGGTCCAAGGGAGGAAAGTA
CC
AGTTGCACTAGGGTCCCCCGCTTCAGTGAGAATCCACAGAATGATCTTCTAACAAGGAAGACAGGAAT
G
CTGATGCAGTACCTGCTCTGCAAGTACAAAATGAAACAGCCAGCATCTAAGGGAGAAATGCTCAAAGTG
ATC
AACAGAAGGTTCAAGGAGCAGTTGCCTGAGATCCTCAAGAAAGCCTCTGAGCGCATTCAGCTAGTTT
TT
GGTCTTGAGGTGAAAGAAATTAAGCCCAATGGTGGCTACTACACCCTTGTTAGCAAGTTAGATCCCAG
T
GTCGGTAATGCTCTGACCACTAGCCTGCCATTTCCCCAGAACGGGCTTTTGATGCCTCTTCTGGGTGTG
ATC
TTCTTAAATGGCAACCGTGCCTCTGAGGCAGAGATCTGGGAATTCCTTAATGTCTTGGGAATTTATG
AT
GGGAAGGTGCACATAATCTTTGGGGAGCCCCGGAAGCTCATCACCAGAGATCTGGTTAAGGAAAAGTA
C
CTGGTATACCAAAAGGAGGCCAACAGTGATCCCCCATCCTTTGAGTTCCTTTGGGGTCCCCGAGCCTAT
GCT
GAAACTACCAAGATGAAAATCCTGGAGTTTTTAGCCGAGGTCAATGAGACCGTTCCTCAGGCCTTCC
CA
ACCCATTATGAGGAGGCTTTGAGAGATCAGGAAGAGAGAGCCCAAGCCGAAGCTGTAGGCAGTCCTGG
C
ACTAGTGCCAAAGATAAGGCAGAGGCTAAAGTCACACTGGTTGACTCCTCTTGCAAATATCAGGCTGAG
TCT
AAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTTGTTGACCCCT
CT
TGCAAAGATAATGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGT
C
CCACTGGTTGACTCCTCTTGCAAAGATCAGGCTGAGTCTAAAGTCACACTTGTGGACTCTTGCAAAGAT
CAG
GCTGAGTCTAAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTAG
TG
GACTCTTCTTGTAAAGATCAGGCTGAGTCTAAAGTCACACTTGTTGACCCCTCTTGCAAAGATAAGGC
C
AAGTCTAAGGTCACACTTGGCTCCTCTCACAAATACAAGGCCAAGTCTAAAGTCACACTGGTTGACTCC
TCT
TGCAAAGATCAGGCTGAGTCTAAAGTCACACTAGTGGACTCTTCTTGTAAAGATCAGGCTGAGTCTA
AA
GTCACACTTGTTGACCCCTCTTGCAAAGATAATGCCAAGTCTAAGGTCACACTTGGCTCCTCTCGCAA
A
TACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCCTCTGGAAAAGATAAGGCAGTCTAA


Translation (556 aa):
MPRGQKSKARAREKRRLVQDEAQELQDAQAKAGEKGKSPSCSNQDSGDAVASTSTAGFPQKSKSQGEAPT
T
TARKGGACRRSRKSTRGPREESTSCTRVPRFSENPQNDLLTRKTGMLMQYLLCKYKMKQPASKGEMLKV
I
NRRFKEQLPEILKKASERIQLVFGLEVKEIKPNGGYYTLVSKLDPSVGNALTTSLPFPQNGLLMPLLGV
I
FLNGNRASEAEIWEFLNVLGIYDGKVHIIFGEPRKLITRDLVKEKYLVYQKEANSDPPSFEFLWGPRAY
A
ETTKMKILEFLAEVNETVPQAFPTHYEEALRDQEERAQAEAVGSPGTSAKDKAEAKVTLVDSSCKYQAE
S
KVTLVDSSCKDQAESKVTLVDPSCKDNAKSKVTLGSSRKYKAKSKVPLVDSSCKDQAESKVTLVDSCKD
Q
AESKVTLVDSSCKDQAESKVTLVDSSCKDQAESKVTLVDPSCKDKAKSKVTLGSSHKYKAKSKVTLVDS
S
CKDQAESKVTLVDSSCKDQAESKVTLVDPSCKDNAKSKVTLGSSRKYKAKSKVPLVDSSGKDKAV




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