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Report for CCDS44502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44502.1 Public Homo sapiens 10 FRG2B 24 110 108 CCDS HistoryNCBI Gene:441581Re-query CCDS DB by CCDS ID:44502.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44502.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425520.2 ENSP00000401310.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000425520.2Link to Ensembl Protein Viewer:ENSP00000401310.1Re-query CCDS DB by Nucleotide ID:ENST00000425520Re-query CCDS DB by Protein ID:ENSP00000401310
Original member Current member NCBI NM_001080998.2 NP_001074467.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080998.2Link to Protein Sequence:NP_001074467.1Re-query CCDS DB by Nucleotide ID:NM_001080998Re-query CCDS DB by Protein ID:NP_001074467Link to BLAST:NP_001074467.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074467.1 278 Q96QU4 278 100% 0 0

Chromosomal Locations for CCDS 44502.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133625099 133625604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133625922 133625999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133626229 133626303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133626565 133626742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGGGAAAGGGAAATGAAGACCCCGATCTCCACTGCTCCTCCATCCAGTGCTCCACTGACCAGCCCCCTT
TCCAACAGATCTCCTTTACAGAAAAGGGCTCAGATGAGAAGAAACCATTCAAAGAAAAAGGCAAGACCGC
CTTCTCCCATTCCAGTGAGAAGCACATACAAAGGCAAGGATCGGAGCCCAATCCAAACAAGGAGAATTCT
GAGGAAACCAAGCTCAAGGCCGGGAACAGCACTGCTGGATCAGAACCAGAGTCCAGCTCATATCGGGAAA
ACTGCAGGAAAAGAAAAATGAGTTCCAAGGACAGCTGCCAAGACACAGCAGGGAACTGTCCAGAAAAGGA
GTGCAGCTTGTCATTGAATAAAAAATCAAGATCCTCCACTCCTGTGCACAACAGTGAAATCCAGGAGACC
TGTGATGCCCACCATAGGGGACGTTCCAGGGCTTGCACTGGGCGCAGCAAGCGGCATAGGTCTCGGGCCC
TAGGAGTCCAAACACCGTCAATTCGAAAAAGCTTGGTGACCTCTGTGCGAGCTATGTCAGAGGCTGTTTA
TCAAGACCTAGCCCAGGTGTGGGCACAGCAGATCCATTCTCCACTTACCTGTGAGCAGCTGACACTGCTC
ACTCGGCTCCGGGGGCCTCTGTGTGCCCAGGTGCAGACCTTGTATTCCATGGCCACCCAGGCAGCTTATG
TCTTCCCTGCTGAGAGCTGGCTTGTCCCAGCCACACTGCCAGGTCCTGGGGAATCAGCCCTGGATAGAGA
AGCCCATCCCTTCCCTGGGCAGGAGATAACTGAGACTGTCAGTGGATCAGATGAGGCTAAGCTGTGA

Translation (278 aa):
MGKGNEDPDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKEKGKTAFSHSSEKHIQRQGSEPNPNKENS
EETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSLSLNKKSRSSTPVHNSEIQET
CDAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSLVTSVRAMSEAVYQDLAQVWAQQIHSPLTCEQLTLL
TRLRGPLCAQVQTLYSMATQAAYVFPAESWLVPATLPGPGESALDREAHPFPGQEITETVSGSDEAKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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