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Report for CCDS10853.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10853.1 Public Homo sapiens 16 PSMB10 24 110 108 CCDS HistoryNCBI Gene:5699Re-query CCDS DB by CCDS ID:10853.1Re-query CCDS DB by GeneID:5699See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10853.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358514.9 ENSP00000351314.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358514.9Link to Ensembl Protein Viewer:ENSP00000351314.4Re-query CCDS DB by Nucleotide ID:ENST00000358514Re-query CCDS DB by Protein ID:ENSP00000351314
Original member Current member NCBI NM_002801.4 NP_002792.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002801.4Link to Protein Sequence:NP_002792.1Re-query CCDS DB by Nucleotide ID:NM_002801Re-query CCDS DB by Protein ID:NP_002792Link to BLAST:NP_002792.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002792.1 273 P40306 273 100% 0 0

Chromosomal Locations for CCDS 10853.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67934560 67934671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67934797 67934948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67935420 67935478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67935582 67935697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67935963 67936103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67936215 67936312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67936398 67936485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67936694 67936749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGCTGAAGCCAGCCCTGGAGCCCCGAGGGGGCTTCTCCTTCGAGAACTGCCAAAGAAATGCATCATTGG
AACGCGTCCTCCCGGGGCTCAAGGTCCCTCACGCACGCAAGACCGGGACCACCATCGCGGGCCTGGTGTT
CCAAGACGGGGTCATTCTGGGCGCCGATACGCGAGCCACTAACGATTCGGTCGTGGCGGACAAGAGCTGC
GAGAAGATCCACTTCATCGCCCCCAAAATCTACTGCTGTGGGGCTGGAGTAGCCGCGGACGCCGAGATGA
CCACACGGATGGTGGCGTCCAAGATGGAGCTACACGCGTTATCTACGGGCCGCGAGCCCCGCGTGGCCAC
GGTCACTCGCATCCTGCGCCAGACGCTCTTCAGGTACCAGGGCCACGTGGGTGCATCGCTGATCGTGGGC
GGCGTAGACCTGACTGGACCGCAGCTCTACGGTGTGCATCCCCATGGCTCCTACAGCCGTCTGCCCTTCA
CAGCCCTGGGCTCTGGTCAGGACGCGGCCCTGGCGGTGCTAGAAGACCGGTTCCAGCCGAACATGACGCT
GGAGGCTGCTCAGGGGCTGCTGGTGGAAGCCGTCACCGCCGGGATCTTGGGTGACCTGGGCTCCGGGGGC
AATGTGGACGCATGTGTGATCACAAAGACTGGCGCCAAGCTGCTGCGGACACTGAGCTCACCCACAGAGC
CCGTGAAGAGGTCTGGCCGCTACCACTTTGTGCCTGGAACCACAGCTGTCCTGACCCAGACAGTGAAGCC
ACTAACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGAGTAA

Translation (273 aa):
MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSC
EKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVG
GVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGG
NVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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