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Report for CCDS5902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5902.1 Public Homo sapiens 7 RARRES2 24 110 108 CCDS HistoryNCBI Gene:5919Re-query CCDS DB by CCDS ID:5902.1Re-query CCDS DB by GeneID:5919See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223271.8 ENSP00000223271.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223271.8Link to Ensembl Protein Viewer:ENSP00000223271.3Re-query CCDS DB by Nucleotide ID:ENST00000223271Re-query CCDS DB by Protein ID:ENSP00000223271
Original member Current member EBI ENST00000466675.5 ENSP00000418009.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000466675.5Link to Ensembl Protein Viewer:ENSP00000418009.1Re-query CCDS DB by Nucleotide ID:ENST00000466675Re-query CCDS DB by Protein ID:ENSP00000418009
Original member Current member EBI ENST00000482669.1 ENSP00000418483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000482669.1Link to Ensembl Protein Viewer:ENSP00000418483.1Re-query CCDS DB by Nucleotide ID:ENST00000482669Re-query CCDS DB by Protein ID:ENSP00000418483
Original member Current member NCBI NM_002889.4 NP_002880.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002889.4Link to Protein Sequence:NP_002880.1Re-query CCDS DB by Nucleotide ID:NM_002889Re-query CCDS DB by Protein ID:NP_002880Link to BLAST:NP_002880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002880.1 163 Q99969 163 100% 0 0

Chromosomal Locations for CCDS 5902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150338625 150338741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150338986 150339081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150340100 150340204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150340436 150340609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGCGACGGCTGCTGATCCCTCTGGCCCTGTGGCTGGGTGCGGTGGGCGTGGGCGTCGCCGAGCTCACGG
AAGCCCAGCGCCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTT
CCAGGAGACCAGTGTGGAGAGCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTT
AAGCTGCAGCAGACAAGCTGCCGGAAGAGGGACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGA
GGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGAGGACAAAGTTCTGGGCCGGTTGGTCCACTG
CCCCATAGAGACCCAAGTTCTGCGGGAGGCTGAGGAGCACCAGGAGACCCAGTGCCTCAGGGTGCAGCGG
GCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTGCCCCGCAGCT
AA

Translation (163 aa):
MRRLLIPLALWLGAVGVGVAELTEAQRRGLQVALEEFHKHPPVQWAFQETSVESAVDTPFPAGIFVRLEF
KLQQTSCRKRDWKKPECKVRPNGRKRKCLACIKLGSEDKVLGRLVHCPIETQVLREAEEHQETQCLRVQR
AGEDPHSFYFPGQFAFSKALPRS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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