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Report for CCDS20627.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20627.1 Public Mus musculus 6 Tas2r113 23 108 98 CCDS HistoryNCBI Gene:387345Re-query CCDS DB by CCDS ID:20627.1Re-query CCDS DB by GeneID:387345See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20627.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000079035.2 ENSMUSP00000078044.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000079035.2Link to Ensembl Protein Viewer:ENSMUSP00000078044.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000079035Re-query CCDS DB by Protein ID:ENSMUSP00000078044
Original member Current member NCBI NM_207018.1 NP_996901.1 Accepted alive Link to Nucleotide Sequence:NM_207018.1Link to Protein Sequence:NP_996901.1Re-query CCDS DB by Nucleotide ID:NM_207018Re-query CCDS DB by Protein ID:NP_996901Link to BLAST:NP_996901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996901.1 309 Q7M711 309 100% 0 0

Chromosomal Locations for CCDS 20627.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 132893011 132893940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGTGGCAGTTCTACAGAGCACACTTCCAATAATTTTCAGTATGGAATTCATAATGGGAACCTTAGGAA
ATGGATTCATTTTTCTGATAGTCTGCATAGACTGGGTCCAAAGAAGAAAAATCTCTTTAGTGGATCAAAT
CCGCACTGCTCTGGCAATTAGCAGAATCGCTCTAATTTGGTTGATATTCCTAGATTGGTGGGTGTCTGTT
CATTACCCAGCATTACACGAAACTGGTAAGATGTTATCAACATATTTGATTTCCTGGACGGTGATCAATC
ATTGTAACTTTTGGCTTACTGCAAACTTGAGCATCCTTTATTTTCTCAAGATAGCCAACTTTTCTAACAT
TATTTTTCTTTATCTAAAGTTTAGATCTAAAAATGTGGTATTAGTGACCCTGTTAGTGTCTCTATTTTTC
TTGTTCTTAAATACTGTAATTATAAAAATATTTTCTGATGTGTGTTTTGATAGTGTTCAAAGAAATGTGT
CTCAAATTTTCATAATGTATAACCATGAACAAATTTGTAAATTTCTTTCCTTTACTAACCCTATGTTCAC
ATTCATACCTTTTGTTATGTCCACGGTAATGTTTTCTTTGCTCATCTTCTCCCTGTGGAGACATCTGAAG
AATATGCAGCACACCGCCAAAGGATGCAGAGACATCAGCACCACAGTGCACATCAGAGCCCTGCAAACCA
TCATTGTGTCTGTAGTGCTATACACTATTTTTTTTCTATCATTTTTTGTTAAAGTTTGGAGTTTTGTGTC
ACCAGAGAGATACCTGATCTTTTTGTTTGTCTGGGCTCTGGGAAATGCTGTTTTTTCTGCTCACCCATTT
GTCATGATTTTGGTAAACAGAAGATTGAGATTGGCTTCTCTCTCTCTGATTTTTTGGCTCTGGTACAGGT
TTAAAAATATAGAAGTATAG

Translation (309 aa):
MVAVLQSTLPIIFSMEFIMGTLGNGFIFLIVCIDWVQRRKISLVDQIRTALAISRIALIWLIFLDWWVSV
HYPALHETGKMLSTYLISWTVINHCNFWLTANLSILYFLKIANFSNIIFLYLKFRSKNVVLVTLLVSLFF
LFLNTVIIKIFSDVCFDSVQRNVSQIFIMYNHEQICKFLSFTNPMFTFIPFVMSTVMFSLLIFSLWRHLK
NMQHTAKGCRDISTTVHIRALQTIIVSVVLYTIFFLSFFVKVWSFVSPERYLIFLFVWALGNAVFSAHPF
VMILVNRRLRLASLSLIFWLWYRFKNIEV


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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