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Report for CCDS9959.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9959.1 Public Homo sapiens 14 SLC25A47 24 110 108 CCDS HistoryNCBI Gene:283600Re-query CCDS DB by CCDS ID:9959.1Re-query CCDS DB by GeneID:283600See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9959.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361529.5 ENSP00000354886.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361529.5Link to Ensembl Protein Viewer:ENSP00000354886.3Re-query CCDS DB by Nucleotide ID:ENST00000361529Re-query CCDS DB by Protein ID:ENSP00000354886
Original member Current member NCBI NM_207117.4 NP_997000.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207117.4Link to Protein Sequence:NP_997000.2Re-query CCDS DB by Nucleotide ID:NM_207117Re-query CCDS DB by Protein ID:NP_997000Link to BLAST:NP_997000.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997000.2 308 Q6Q0C1-1 308 100% 0 0

Chromosomal Locations for CCDS 9959.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 100323415 100323442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100325788 100325831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100326157 100326228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100327188 100327370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100328726 100329044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 100329365 100329645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGATTTTGTCGCTGGAGCCATCGGAGGCGTCTGCGGTGTTGCTGTGGGCTACCCCCTGGACACGGTGA
AGGTCAGGATCCAGACGGAGCCAAAGTACACAGGCATCTGGCACTGCGTCCGGGATACGTATCACCGAGA
GCGCGTGTGGGGCTTCTACCGGGGCCTCTCGCTGCCCGTGTGCACGGTGTCCCTGGTATCTTCCGTGTCT
TTTGGCACCTACCGCCACTGCCTGGCGCACATCTGCCGGCTCCGGTACGGCAACCCTGACGCCAAGCCCA
CCAAGGCCGACATCACGCTCTCGGGATGCGCCTCCGGCCTCGTCCGCGTGTTCCTGACGTCGCCCACTGA
GGTGGCCAAAGTCCGCTTGCAGACGCAGACACAGGCGCAGAAGCAGCAGCGGCGGCTTTCGGCCTCGGGG
CCGTTGGCTGTGCCCCCCATGTGTCCTGTGCCCCCAGCCTGCCCAGAGCCCAAGTACCGCGGGCCACTGC
ACTGCCTGGCCACGGTAGCCCGTGAGGAGGGGCTGTGCGGCCTCTACAAGGGCAGCTCGGCCCTGGTCTT
ACGGGACGGCCACTCCTTTGCCACCTACTTCCTTTCCTACGCGGTCCTCTGCGAGTGGCTCAGCCCCGCT
GGCCACAGCCGGCCAGATGTCCCGGGCGTGCTGGTGGCCGGGGGCTGTGCAGGAGTCCTGGCCTGGGCTG
TGGCCACCCCCATGGACGTGATCAAGTCGAGACTGCAGGCAGACGGGCAGGGCCAGAGGCGCTACCGGGG
TCTCCTGCACTGTATGGTGACCAGCGTTCGAGAGGAGGGACCCCGGGTCCTTTTCAAGGGGCTGGTACTC
AATTGCTGCCGCGCCTTCCCTGTCAACATGGTGGTCTTCGTCGCCTATGAGGCAGTGCTGAGGCTCGCCC
GGGGTCTGCTCACATAG

Translation (308 aa):
MDFVAGAIGGVCGVAVGYPLDTVKVRIQTEPKYTGIWHCVRDTYHRERVWGFYRGLSLPVCTVSLVSSVS
FGTYRHCLAHICRLRYGNPDAKPTKADITLSGCASGLVRVFLTSPTEVAKVRLQTQTQAQKQQRRLSASG
PLAVPPMCPVPPACPEPKYRGPLHCLATVAREEGLCGLYKGSSALVLRDGHSFATYFLSYAVLCEWLSPA
GHSRPDVPGVLVAGGCAGVLAWAVATPMDVIKSRLQADGQGQRRYRGLLHCMVTSVREEGPRVLFKGLVL
NCCRAFPVNMVVFVAYEAVLRLARGLLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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