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Report for CCDS32762.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32762.1 Public Homo sapiens 17 NPTX1 24 110 108 CCDS HistoryNCBI Gene:4884Re-query CCDS DB by CCDS ID:32762.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32762.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306773.5 ENSP00000307549.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306773.5Link to Ensembl Protein Viewer:ENSP00000307549.4Re-query CCDS DB by Nucleotide ID:ENST00000306773Re-query CCDS DB by Protein ID:ENSP00000307549
Original member Current member NCBI NM_002522.4 NP_002513.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002522.4Link to Protein Sequence:NP_002513.2Re-query CCDS DB by Nucleotide ID:NM_002522Re-query CCDS DB by Protein ID:NP_002513Link to BLAST:NP_002513.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002513.2 432 Q15818 432 100% 0 0

Chromosomal Locations for CCDS 32762.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 80470813 80471034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80471732 80471911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80473200 80473444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80475511 80475718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80476003 80476446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGCCGGCCGGCCGCGCCGCGCGCACCTGTGCGCTGCTCGCCCTCTGCCTCCTGGGCGCCGGGGCCCAGG
ATTTCGGGCCGACGCGCTTCATCTGCACCTCGGTGCCCGTGGACGCCGACATGTGCGCCGCGTCCGTGGC
CGCCGGCGGCGCCGAGGAGCTCCGGAGCAGCGTGCTGCAGCTCCGCGAGACGGTGCTGCAGCAGAAGGAG
ACCATCCTGAGCCAGAAGGAGACCATCCGCGAGCTGACCGCCAAGCTGGGCCGCTGCGAGAGCCAGAGCA
CGCTGGACCCCGGAGCCGGCGAGGCCCGGGCGGGCGGCGGCCGCAAGCAGCCCGGCTCGGGCAAGAACAC
CATGGGCGACCTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTC
AAAACCCGCCTGGAGAACCTCGAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGACCAACAGCCTCAAGG
ATCTGCTGCAGAGCAAGATCGATGAGCTGGAGAGGCAGGTGCTGTCCCGGGTGAACACCCTGGAGGAGGG
CAAGGGGGGCCCCAGGAACGACACCGAGGAGAGGGTCAAGATCGAGACCGCCCTGACCTCCCTGCACCAG
CGGATCAGCGAGCTCGAGAAAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAGCTCACATTCCCAC
TGCGGACCAACTATATGTATGCCAAGGTGAAGAAGAGCCTGCCAGAGATGTACGCCTTCACTGTCTGCAT
GTGGCTCAAGTCCAGCGCCACGCCAGGTGTGGGCACGCCCTTCTCCTACGCTGTGCCCGGCCAGGCCAAC
GAGCTGGTCCTCATTGAGTGGGGCAACAACCCCATGGAGATCCTCATCAATGACAAGGTGGCCAAGTTGC
CTTTTGTCATCAATGATGGCAAGTGGCACCACATCTGTGTCACCTGGACCACCCGGGACGGGGTCTGGGA
GGCCTACCAGGATGGCACGCAGGGTGGCAGTGGCGAGAACTTGGCGCCCTATCACCCCATCAAGCCCCAG
GGCGTGCTGGTGCTGGGCCAGGAGCAGGACACTCTGGGTGGTGGGTTTGATGCCACCCAGGCATTTGTGG
GTGAGCTGGCCCACTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTG
CAGCACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAATCCCACATCGAGATCTACGGAGGGGCC
ACCAAGTGGACCTTCGAGGCCTGTCGCCAGATCAACTGA

Translation (432 aa):
MPAGRAARTCALLALCLLGAGAQDFGPTRFICTSVPVDADMCAASVAAGGAEELRSSVLQLRETVLQQKE
TILSQKETIRELTAKLGRCESQSTLDPGAGEARAGGGRKQPGSGKNTMGDLSRTPAAETLSQLGQTLQSL
KTRLENLEQYSRLNSSSQTNSLKDLLQSKIDELERQVLSRVNTLEEGKGGPRNDTEERVKIETALTSLHQ
RISELEKGQKDNRPGDKFQLTFPLRTNYMYAKVKKSLPEMYAFTVCMWLKSSATPGVGTPFSYAVPGQAN
ELVLIEWGNNPMEILINDKVAKLPFVINDGKWHHICVTWTTRDGVWEAYQDGTQGGSGENLAPYHPIKPQ
GVLVLGQEQDTLGGGFDATQAFVGELAHFNIWDRKLTPGEVYNLATCSTKALSGNVIAWAESHIEIYGGA
TKWTFEACRQIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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