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Report for CCDS2334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2334.1 Public Homo sapiens 2 ORC2 24 110 108 CCDS HistoryNCBI Gene:4999Re-query CCDS DB by CCDS ID:2334.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000234296.7 ENSP00000234296.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000234296.7Link to Ensembl Protein Viewer:ENSP00000234296.2Re-query CCDS DB by Nucleotide ID:ENST00000234296Re-query CCDS DB by Protein ID:ENSP00000234296
Original member Current member NCBI NM_006190.5 NP_006181.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006190.5Link to Protein Sequence:NP_006181.1Re-query CCDS DB by Nucleotide ID:NM_006190Re-query CCDS DB by Protein ID:NP_006181Link to BLAST:NP_006181.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006181.1 577 Q13416 577 100% 0 0

Chromosomal Locations for CCDS 2334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 200911301 200911387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200913295 200913413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200913931 200913992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200920222 200920393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200920993 200921139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200925836 200925932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200926768 200926900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200931339 200931448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200933876 200933974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200935699 200935892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200937906 200937966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200941248 200941279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200942685 200942777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200949554 200949643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200957401 200957544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200958030 200958123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGAGTAAACCAGAATTAAAGGAAGACAAGATGCTGGAGGTTCACTTTGTGGGAGATGATGATGTTCTTA
ATCACATTCTAGATAGAGAAGGAGGAGCTAAATTGAAGAAGGAGCGAGCGCAGCTTTTGGTCAACCCCAA
AAAAATAATAAAGAAGCCAGAATATGATTTGGAGGAAGATGACCAGGAGGTCTTAAAAGATCAGAACTAT
GTGGAAATTATGGGAAGAGATGTTCAAGAATCATTGAAAAATGGCTCTGCTACAGGTGGTGGAAATAAAG
TTTATTCTTTTCAGAATAGAAAACACTCTGAAAAGATGGCTAAATTAGCTTCAGAACTAGCAAAAACACC
ACAAAAAAGTGTTTCATTCAGTTTGAAGAATGATCCTGAGATTACGATAAACGTTCCTCAAAGTAGCAAG
GGCCATTCTGCTTCAGACAAGGTTCAACCGAAGAACAATGACAAAAGTGAATTTCTGTCAACAGCACCTC
GTAGTCTAAGAAAAAGATTAATAGTTCCAAGGTCTCATTCTGACAGTGAAAGCGAATATTCTGCTTCCAA
CTCAGAGGATGATGAAGGGGTTGCACAGGAACATGAAGAGGACACTAATGCAGTCATATTCAGCCAAAAG
ATTCAAGCTCAGAATAGAGTAGTTTCAGCTCCTGTTGGCAAAGAAACACCTTCTAAGAGAATGAAAAGAG
ATAAAACAAGTGACTTAGTAGAAGAATATTTTGAAGCTCACAGCAGTTCAAAAGTTTTAACCTCTGATAG
AACACTGCAGAAGCTAAAGAGAGCTAAACTGGATCAGCAAACTTTGCGTAACTTATTGAGCAAGGTTTCC
CCTTCCTTTTCTGCCGAACTTAAACAACTAAATCAACAGTATGAAAAATTATTTCATAAATGGATGCTGC
AATTACACCTTGGGTTCAACATTGTGCTTTATGGTTTGGGTTCTAAGAGAGATTTACTAGAAAGGTTTCG
AACCACTATGCTGCAAGATTCCATTCACGTTGTCATCAATGGCTTCTTTCCTGGAATCAGTGTGAAATCA
GTCCTGAATTCTATAACAGAAGAAGTCCTCGATCATATGGGTACTTTCCGCAGTATACTGGATCAGCTAG
ACTGGATAGTAAACAAATTTAAAGAAGATTCTTCTTTAGAACTCTTCCTTCTCATCCACAATTTGGATAG
CCAGATGTTGAGAGGAGAGAAGAGCCAGCAAATCATTGGTCAGTTGTCATCTTTGCATAACATTTACCTT
ATAGCATCCATTGACCACCTCAATGCTCCTCTCATGTGGGATCATGCAAAGCAGAGTCTTTTTAACTGGC
TCTGGTATGAAACTACTACATACAGTCCTTATACTGAAGAAACCTCCTATGAGAACTCTCTTCTGGTAAA
GCAGTCTGGATCCCTGCCACTTAGCTCCCTTACTCATGTCTTACGAAGCCTTACCCCTAATGCAAGGGGA
ATTTTCAGGCTACTAATAAAATACCAGCTGGACAACCAGGATAACCCTTCTTACATTGGCCTTTCTTTTC
AAGATTTTTACCAGCAGTGTCGGGAGGCATTCCTCGTCAATAGTGATCTGACACTCCGGGCCCAGTTAAC
TGAATTTAGGGACCACAAGCTTATAAGAACAAAGAAGGGAACTGATGGAGTAGAGTATTTATTAATTCCT
GTTGATAATGGAACATTGACTGATTTCTTGGAAAAGGAAGAAGAGGAGGCTTGA

Translation (577 aa):
MSKPELKEDKMLEVHFVGDDDVLNHILDREGGAKLKKERAQLLVNPKKIIKKPEYDLEEDDQEVLKDQNY
VEIMGRDVQESLKNGSATGGGNKVYSFQNRKHSEKMAKLASELAKTPQKSVSFSLKNDPEITINVPQSSK
GHSASDKVQPKNNDKSEFLSTAPRSLRKRLIVPRSHSDSESEYSASNSEDDEGVAQEHEEDTNAVIFSQK
IQAQNRVVSAPVGKETPSKRMKRDKTSDLVEEYFEAHSSSKVLTSDRTLQKLKRAKLDQQTLRNLLSKVS
PSFSAELKQLNQQYEKLFHKWMLQLHLGFNIVLYGLGSKRDLLERFRTTMLQDSIHVVINGFFPGISVKS
VLNSITEEVLDHMGTFRSILDQLDWIVNKFKEDSSLELFLLIHNLDSQMLRGEKSQQIIGQLSSLHNIYL
IASIDHLNAPLMWDHAKQSLFNWLWYETTTYSPYTEETSYENSLLVKQSGSLPLSSLTHVLRSLTPNARG
IFRLLIKYQLDNQDNPSYIGLSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKKGTDGVEYLLIP
VDNGTLTDFLEKEEEEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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