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Report for CCDS25053.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25053.1 Public Mus musculus 11 Inpp5k 23 108 98 CCDS HistoryNCBI Gene:19062Re-query CCDS DB by CCDS ID:25053.1Re-query CCDS DB by GeneID:19062See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25053.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006286.8 ENSMUSP00000006286.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006286.8Link to Ensembl Protein Viewer:ENSMUSP00000006286.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000006286Re-query CCDS DB by Protein ID:ENSMUSP00000006286
Original member Current member NCBI NM_008916.2 NP_032942.1 Accepted alive Link to Nucleotide Sequence:NM_008916.2Link to Protein Sequence:NP_032942.1Re-query CCDS DB by Nucleotide ID:NM_008916Re-query CCDS DB by Protein ID:NP_032942Link to BLAST:NP_032942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032942.1 468 Q8C5L6 468 100% 0 0

Chromosomal Locations for CCDS 25053.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 75631100 75631197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75633069 75633176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75633463 75633571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75636944 75637060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75637410 75637585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75638145 75638256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75639456 75639565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75645428 75645617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75646786 75646923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75647193 75647276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75647402 75647506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75647652 75647711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGCAGCACGGAGACAGGAACACACCGGGTTACCGCGAGGGAATAATGTCGGCTGTGAGTCTAAGGAGGC
CGAGCGCACCGAAAGGCTTTGCACTCAGCGTACATGTTGTGACGTGGAATGTGGCCTCCGCAGCCCCCAC
TGTAGACCTCAGTGACCTACTTCAACTGAACAACCAAGACCTGAATCTGGACATATATATCATTGGTTTG
CAGGAAATGAATTTTGGAATCATAAGCCTTCTTTCTGATGCTGCTTTTGAAGACCCATGGAGCAGTCTCT
TCATGGATATGCTTTCCCCACTGAACTTTGTCAAGATCTCTCAAGTCCGTATGCAGGGGCTTCTCTTACT
GGTCTTTGCCAAGTACCAGCATTTGCCCTACATCCAGATCATCTCTACGAAATCCACCCCCACTGGCCTC
TACGGGTACTGGGGGAACAAAGGGGGAGTCAACGTCTGCCTGAAGCTTTATGGCTACTACGTCAGCATCA
TCAATTGCCACCTGCCTCCTCATATGTATAACAATGACCAGCGCCTGGAACACTTTGACCGAATCTTGGA
GAGTCTGACTTTTGAGGGATATGATGTCCCCAACATCCTGGACCATGACCTCATTCTGTGGTTTGGAGAC
ATGAACTTTCGAATTGAGGACTTTGGGTTGCTCTTTGTGCAGGAGAGTATAACGAGGAAGTACTACAAAG
AGCTGTGGGAGAAAGATCAGCTCTTCATTGCCAAGAAAAATGACCAGCTGCTCCGCGAGTTCCAGGAAGG
CCCGCTGCTCTTCCCACCCACCTACAAGTTTGACCGTCACTCCAACAACTATGACACCAGTGAGAAAAAA
CGCAAGCCTGCGTGGACTGACCGCATCCTGTGGAGGTTGAAGCGGCAGCCGTCCCAGGCCAGCCCCTTGG
CCTCCAGTGTACCAACCTCCTACTTCTTGCTGACACTGAAGAACTATGTCAGCCACATGGCATACAGCAT
CAGTGACCATAAGCCTGTCACTGGCACCTTTGACTTGGAGCTGAACCCACTGATGTCTGTCCCACTGATC
ACTATGATGCCTGAACACCTGTGGACCATGGAGAACGACATGCTGATCAGCTACACCTCCACCCCAGAGT
TCCTCAGCAGCTCCTGGGACTGGATCGGACTATACAAGGTGGGGATGCGTCACATTAATGACTATGTAGC
CTATGTCTGGGTCGGCGACAACCAAGTCTCCTATGGTAACAACCCAAACCAGGTGTATATCAACATCAGT
GCTATCCCTGACACTGAGGATCAGTTTCTTCTCTGTTACTATAGCAACAACCTGCACTCTGTAGTGGGGA
TAAGTCAACCCTTCAAGATCCCGATTCGCTCCTTTTTGAGAGAGGACACACTGTATGAGCCTGAGCCACA
GATCTGA

Translation (468 aa):
MQHGDRNTPGYREGIMSAVSLRRPSAPKGFALSVHVVTWNVASAAPTVDLSDLLQLNNQDLNLDIYIIGL
QEMNFGIISLLSDAAFEDPWSSLFMDMLSPLNFVKISQVRMQGLLLLVFAKYQHLPYIQIISTKSTPTGL
YGYWGNKGGVNVCLKLYGYYVSIINCHLPPHMYNNDQRLEHFDRILESLTFEGYDVPNILDHDLILWFGD
MNFRIEDFGLLFVQESITRKYYKELWEKDQLFIAKKNDQLLREFQEGPLLFPPTYKFDRHSNNYDTSEKK
RKPAWTDRILWRLKRQPSQASPLASSVPTSYFLLTLKNYVSHMAYSISDHKPVTGTFDLELNPLMSVPLI
TMMPEHLWTMENDMLISYTSTPEFLSSSWDWIGLYKVGMRHINDYVAYVWVGDNQVSYGNNPNQVYINIS
AIPDTEDQFLLCYYSNNLHSVVGISQPFKIPIRSFLREDTLYEPEPQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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