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Report for CCDS21752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21752.1 Public Mus musculus 7 Dkk3 23 108 98 CCDS HistoryNCBI Gene:50781Re-query CCDS DB by CCDS ID:21752.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21752.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033036.6 ENSMUSP00000033036.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033036.6Link to Ensembl Protein Viewer:ENSMUSP00000033036.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033036Re-query CCDS DB by Protein ID:ENSMUSP00000033036
Original member Current member NCBI NM_001360260.1 NP_001347189.1 Accepted alive Link to Nucleotide Sequence:NM_001360260.1Link to Protein Sequence:NP_001347189.1Re-query CCDS DB by Nucleotide ID:NM_001360260Re-query CCDS DB by Protein ID:NP_001347189Link to BLAST:NP_001347189.1
Original member Current member NCBI NM_015814.3 NP_056629.1 Accepted alive Link to Nucleotide Sequence:NM_015814.3Link to Protein Sequence:NP_056629.1Re-query CCDS DB by Nucleotide ID:NM_015814Re-query CCDS DB by Protein ID:NP_056629Link to BLAST:NP_056629.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001347189.1 349 Q9QUN9 349 100% 0 0
NP_056629.1 349 Q9QUN9 349 100% 0 0

Chromosomal Locations for CCDS 21752.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 112118211 112118430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112119348 112119504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112120388 112120532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112121590 112121682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112148961 112149044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112150611 112150748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112158183 112158395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGCAGCGGCTCGGGGGTATTTTGCTGTGTACACTGCTGGCGGCGGCGGTCCCCACTGCTCCTGCTCCTT
CCCCGACGGTCACTTGGACTCCGGCGGAGCCGGGCCCAGCTCTCAACTACCCTCAGGAGGAAGCTACGCT
CAATGAGATGTTTCGAGAGGTGGAGGAGCTGATGGAAGACACTCAGCACAAACTGCGCAGTGCCGTGGAG
GAGATGGAGGCGGAAGAAGCAGCTGCTAAAACGTCCTCTGAGGTGAACCTGGCAAGCTTACCTCCCAACT
ATCACAATGAGACCAGCACGGAGACCAGGGTGGGAAATAACACAGTCCATGTGCACCAGGAAGTTCACAA
GATAACCAACAACCAGAGTGGACAGGTGGTCTTTTCTGAGACAGTCATTACATCTGTAGGGGATGAAGAA
GGCAAGAGGAGCCATGAATGTATCATTGATGAAGACTGTGGGCCCACCAGGTACTGCCAGTTCTCCAGCT
TCAAGTACACCTGCCAGCCATGCCGGGACCAGCAGATGCTATGCACCCGAGACAGTGAGTGCTGTGGAGA
CCAGCTGTGTGCCTGGGGTCACTGCACCCAAAAGGCCACCAAAGGTGGCAATGGGACCATCTGTGACAAC
CAGAGGGATTGCCAGCCTGGCCTGTGTTGTGCCTTCCAAAGAGGCCTGCTGTTCCCCGTGTGCACACCCC
TGCCCGTGGAGGGAGAGCTCTGCCATGACCCCACCAGCCAGCTGCTGGATCTCATCACCTGGGAACTGGA
GCCTGAAGGAGCTTTGGACCGATGCCCCTGCGCCAGTGGCCTCCTATGCCAGCCACACAGCCACAGTCTG
GTGTACATGTGCAAGCCAGCCTTCGTGGGCAGCCATGACCACAGTGAGGAGAGCCAGCTGCCCAGGGAGG
CCCCGGATGAGTACGAAGATGTTGGCTTCATAGGGGAAGTGCGCCAGGAGCTGGAAGACCTGGAGCGGAG
CCTAGCCCAGGAGATGGCATTTGAGGGGCCTGCCCCTGTGGAGTCACTAGGCGGAGAGGAGGAGATTTAG

Translation (349 aa):
MQRLGGILLCTLLAAAVPTAPAPSPTVTWTPAEPGPALNYPQEEATLNEMFREVEELMEDTQHKLRSAVE
EMEAEEAAAKTSSEVNLASLPPNYHNETSTETRVGNNTVHVHQEVHKITNNQSGQVVFSETVITSVGDEE
GKRSHECIIDEDCGPTRYCQFSSFKYTCQPCRDQQMLCTRDSECCGDQLCAWGHCTQKATKGGNGTICDN
QRDCQPGLCCAFQRGLLFPVCTPLPVEGELCHDPTSQLLDLITWELEPEGALDRCPCASGLLCQPHSHSL
VYMCKPAFVGSHDHSEESQLPREAPDEYEDVGFIGEVRQELEDLERSLAQEMAFEGPAPVESLGGEEEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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