NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS40547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40547.1 Public Mus musculus 9 Eif3g 23 108 98 CCDS HistoryNCBI Gene:53356Re-query CCDS DB by CCDS ID:40547.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 40547.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004206.9 ENSMUSP00000004206.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004206.9Link to Ensembl Protein Viewer:ENSMUSP00000004206.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000004206Re-query CCDS DB by Protein ID:ENSMUSP00000004206
Original member Current member NCBI NM_016876.3 NP_058572.2 Accepted alive Link to Nucleotide Sequence:NM_016876.3Link to Protein Sequence:NP_058572.2Re-query CCDS DB by Nucleotide ID:NM_016876Re-query CCDS DB by Protein ID:NP_058572Link to BLAST:NP_058572.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058572.2 320 Q9Z1D1 320 100% 0 0

Chromosomal Locations for CCDS 40547.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 20894427 20894442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20894633 20894739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20894833 20894969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20895089 20895196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20895828 20896017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20896116 20896220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20897707 20897766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20897888 20897976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20898084 20898167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20898378 20898424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 20898544 20898563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGCCGACTGGCGACTTTGACTCGAAGCCCAGCTGGGCCGACCAGGTGGAGGAGGAGGGAGAGGACGACA
AATGTGTCACCAGCGAGCTCCTGAAAGGAATCCCTCTGCCCACCGGGGACACCAGTCCAGAGCCCGAGTT
ACTGCCCGGAGACCCGCTGCCACCTCCCAAGGAAGTCATCAATGGGAACATAAAGACAGTGACTGAGTAC
AAGATAGAGGAAGATGGGAAGAAATTCAAGATTGTCAGAACCTTCAGGATTGAGACCCGGAAGGCATCAA
AGGCTGTGGCAAGGAGGAAGAATTGGAAGAAGTTTGGCAACTCGGAGTTTGACCCACCGGGGCCCAATGT
GGCCACTACCACAGTCAGTGATGACGTCTCTATGACATTCATCACTAGCAAAGAGGACCTAAACTGTCAG
GAGGAGGAGGACCCAATGAACAAGCTTAAGGGCCAGAAGATTGTGTCCTGCCGCATTTGCAAGGGCGACC
ATTGGACCACCCGTTGCCCCTACAAGGACACACTAGGACCCATGCAGAAGGAGCTGGCTGAGCAGCTCGG
CCTGTCTACTGGGGAGAAGGAGAAACTGCCAGGAGAGCTGGAGCCCGTGCAGGCCGCCCAGAGCAAGACA
GGGAAGTATGTGCCCCCCAGCCTCCGGGACGGGGCCAGCCGCCGTGGGGAGTCCATGCAGCCAAACCGCA
GAGCTGACGACAATGCCACCATCCGTGTCACTAACCTGTCCGAGGACACTCGTGAGACTGACTTGCAGGA
ACTCTTCCGGCCTTTCGGCTCCATCTCCCGAATCTACTTGGCCAAGGACAAGACTACTGGGCAGTCCAAG
GGTTTTGCTTTTATCAGCTTTCACCGCCGGGAGGATGCTGCACGTGCCATTGCAGGGGTGTCTGGTTTTG
GCTACGACCATCTTATCCTCAATGTCGAGTGGGCCAAGCCATCAACGAATTAA

Translation (320 aa):
MPTGDFDSKPSWADQVEEEGEDDKCVTSELLKGIPLPTGDTSPEPELLPGDPLPPPKEVINGNIKTVTEY
KIEEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQ
EEEDPMNKLKGQKIVSCRICKGDHWTTRCPYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQAAQSKT
GKYVPPSLRDGASRRGESMQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK
GFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAKPSTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH