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Report for CCDS32717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32717.1 Public Homo sapiens 17 TTYH2 24 110 108 CCDS HistoryNCBI Gene:94015Re-query CCDS DB by CCDS ID:32717.1Re-query CCDS DB by GeneID:94015See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269346.9 ENSP00000269346.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269346.9Link to Ensembl Protein Viewer:ENSP00000269346.4Re-query CCDS DB by Nucleotide ID:ENST00000269346Re-query CCDS DB by Protein ID:ENSP00000269346
Original member Current member NCBI NM_032646.6 NP_116035.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032646.6Link to Protein Sequence:NP_116035.5Re-query CCDS DB by Nucleotide ID:NM_032646Re-query CCDS DB by Protein ID:NP_116035Link to BLAST:NP_116035.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116035.5 534 Q9BSA4-1 534 100% 0 0

Chromosomal Locations for CCDS 32717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74213588 74213716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74222485 74222657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74230888 74230999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74237294 74237514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74243374 74243469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74243977 74244049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74249011 74249080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74249344 74249399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74249936 74250028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74250265 74250357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74252234 74252376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74253081 74253266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74253755 74253833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74260129 74260209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1605 nt):
ATGCAGGCGGCGCGCGTGGACTACATCGCTCCCTGGTGGGTCGTGTGGCTGCACAGCGTCCCGCACGTCG
GCCTGCGCCTGCAGCCCGTGAACAGCACCTTCAGCCCCGGCGACGAGAGTTACCAGGAGTCGCTGCTGTT
CCTGGGGCTGGTGGCCGCCGTCTGCCTGGGCCTGAACCTCATCTTCCTTGTGGCTTACCTGGTCTGTGCA
TGCCACTGCCGGCGGGACGATGCGGTGCAGACCAAGCAGCACCACTCCTGCTGCATCACCTGGACGGCCG
TGGTGGCCGGGCTCATCTGCTGTGCTGCGGTGGGCGTTGGTTTCTATGGAAACAGCGAGACCAACGATGG
GGCGTACCAGCTGATGTACTCCTTGGACGATGCCAACCACACCTTCTCTGGGATCGATGCTCTGGTTTCC
GGAACTACCCAGAAGATGAAGGTGGACCTAGAGCAGCACCTGGCCCGGCTCAGTGAGATCTTTGCTGCCC
GGGGCGATTACCTGCAGACCCTGAAGTTCATACAGCAGATGGCGGGCAGCGTTGTTGTTCAGCTCTCAGG
ACTGCCCGTGTGGAGGGAGGTCACCATGGAGCTGACCAAGCTATCCGACCAGACTGGCTACGTGGAGTAC
TACAGGTGGCTCTCCTACCTCCTGCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGCCTGCCTGGGAC
TGGCCAAGCGCTCCAAGTGTCTCCTGGCCTCGATGCTGTGCTGTGGGGCACTGAGCCTGCTCCTCAGTTG
GGCATCCCTGGCCGCTGATGGCTCTGCGGCAGTGGCCACCAGTGACTTCTGTGTGGCTCCTGACACCTTC
ATCCTGAACGTCACGGAGGGCCAGATCAGCACAGAGGTGACTCGCTACTACCTGTATTGCAGCCAGAGTG
GAAGCAGCCCCTTCCAGCAGACCCTGACCACCTTCCAGCGCGCACTTACCACCATGCAGATCCAGGTCGC
GGGGCTGCTGCAGTTTGCCGTGCCCCTCTTCTCCACTGCAGAGGAAGACCTGCTTGCAATCCAGCTCCTG
CTGAACTCCTCAGAGTCCAGCCTTCACCAGCTGACCGCCATGGTGGACTGCCGAGGGCTGCACAAGGATT
ATCTGGACGCTCTTGCTGGCATCTGCTACGACGGCCTCCAGGGCTTGCTGTACCTTGGCCTCTTCTCCTT
CCTGGCCGCCCTCGCCTTCTCCACCATGATCTGTGCAGGGCCAAGGGCCTGGAAGCACTTCACCACCAGA
AACAGAGACTACGATGACATTGATGATGATGACCCCTTTAACCCCCAAGCCTGGCGCATGGCGGCTCACA
GTCCCCCGAGGGGACAGCTTCACAGCTTCTGCAGCTACAGCAGTGGCCTGGGAAGTCAGACCAGCCTGCA
GCCCCCGGCCCAGACCATCTCCAACGCCCCTGTCTCCGAGTACATGAACCAAGCCATGCTCTTTGGTAGG
AACCCACGCTACGAGAACGTGCCACTAATCGGGAGAGCCTCCCCTCCGCCTACGTACTCTCCCAGCATGA
GAGCCACCTACCTGTCTGTGGCGGATGAGCACCTGAGGCACTACGGGAATCAGTTTCCAGCCTAA

Translation (534 aa):
MQAARVDYIAPWWVVWLHSVPHVGLRLQPVNSTFSPGDESYQESLLFLGLVAAVCLGLNLIFLVAYLVCA
CHCRRDDAVQTKQHHSCCITWTAVVAGLICCAAVGVGFYGNSETNDGAYQLMYSLDDANHTFSGIDALVS
GTTQKMKVDLEQHLARLSEIFAARGDYLQTLKFIQQMAGSVVVQLSGLPVWREVTMELTKLSDQTGYVEY
YRWLSYLLLFILDLVICLIACLGLAKRSKCLLASMLCCGALSLLLSWASLAADGSAAVATSDFCVAPDTF
ILNVTEGQISTEVTRYYLYCSQSGSSPFQQTLTTFQRALTTMQIQVAGLLQFAVPLFSTAEEDLLAIQLL
LNSSESSLHQLTAMVDCRGLHKDYLDALAGICYDGLQGLLYLGLFSFLAALAFSTMICAGPRAWKHFTTR
NRDYDDIDDDDPFNPQAWRMAAHSPPRGQLHSFCSYSSGLGSQTSLQPPAQTISNAPVSEYMNQAMLFGR
NPRYENVPLIGRASPPPTYSPSMRATYLSVADEHLRHYGNQFPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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