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Report for CCDS64820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64820.1 Public Homo sapiens 8 PRR23D1 24 110 108 CCDS HistoryNCBI Gene:100131608Re-query CCDS DB by CCDS ID:64820.1Re-query CCDS DB by GeneID:100131608See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533250.2 ENSP00000436891.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533250.2Link to Ensembl Protein Viewer:ENSP00000436891.1Re-query CCDS DB by Nucleotide ID:ENST00000533250Re-query CCDS DB by Protein ID:ENSP00000436891
Original member Current member NCBI NM_001282479.1 NP_001269408.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282479.1Link to Protein Sequence:NP_001269408.1Re-query CCDS DB by Nucleotide ID:NM_001282479Re-query CCDS DB by Protein ID:NP_001269408Link to BLAST:NP_001269408.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269408.1 279 E9PI22 279 100% 0 0

Chromosomal Locations for CCDS 64820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 7539805 7539881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 7540645 7540706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 7540952 7541019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 7541248 7541880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGTATGGTTACCGGCGCTTAAGAAGCCCCAGAGATTCCCAGACAGAACCGCAGAATGACAATGAAGGAG
AGACCAGTTTGGCTACCACACAAATGAATCCACCCAAACGTCGCCAAGTGGAGCAGGGTCCCAGTACAGG
TGCAAAAAAACCCTCAATTTCAGGAGCTCCACACCTGAATTCATACCAGTCCCTGGAACTTCCCCAGAAT
CAGCAGGATTCTGGCACTGAGGAGCTCATGATAGTCCTGGAACAAGGGACAGAAGTGAGGTTGAGCCTGG
AAGAGGTCATCCTCATCTTGGCCCCAGAGACAGTGCTGCAGCTGACCCTGGAGAACACAGTCCTTGTGAT
TGTCCCTGAGCATGTCCTGAGGTCAGAAGATGGCCTGCAGTCCCCTGTGCAGATCCAGTACATCATACCT
TCCGTTGATGACTTCAGCTTGGAGTTCCATGCTCAAGATGGAGACATCTCAGACATGAGAAGAGAGAATG
TGCCTTTTTCACCTGCAGAAGAAGGGAAGGCAGCACCCCTGTATCAGCAGCCCTTGATGATACCCCAAGC
AAACCACATGGCTGGGATCAGCCCTTCTTTCCTAGTAACCCCATTGTGCATTCCACGCTGTCGGGCAGCC
TTCCCCCAATGCTACCCTCTACCACCCACACCTAGTCCTGTGGGACGCCCTAGACCAGCCGACTCCAGTT
TCAGCCTGCATGGTATGGAGCTCTTGTGCACCTCCTCCCTCAGACCTATGCCCCCTTCACCAAGTCCTGG
TCCCCAGGTCTATCACAGGGTTCACCATAGGCCTCCCAGCAGGGCACGGAGATGTCTCTTTAGGAAGTGA

Translation (279 aa):
MYGYRRLRSPRDSQTEPQNDNEGETSLATTQMNPPKRRQVEQGPSTGAKKPSISGAPHLNSYQSLELPQN
QQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLVIVPEHVLRSEDGLQSPVQIQYIIP
SVDDFSLEFHAQDGDISDMRRENVPFSPAEEGKAAPLYQQPLMIPQANHMAGISPSFLVTPLCIPRCRAA
FPQCYPLPPTPSPVGRPRPADSSFSLHGMELLCTSSLRPMPPSPSPGPQVYHRVHHRPPSRARRCLFRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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