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Report for CCDS61192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61192.1 Public Homo sapiens 12 BEST3 24 110 108 CCDS HistoryNCBI Gene:144453Re-query CCDS DB by CCDS ID:61192.1Re-query CCDS DB by GeneID:144453See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61192.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000553096.5 ENSP00000449548.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553096.5Link to Ensembl Protein Viewer:ENSP00000449548.1Re-query CCDS DB by Nucleotide ID:ENST00000553096Re-query CCDS DB by Protein ID:ENSP00000449548
Original member Current member NCBI NM_001282613.2 NP_001269542.1 Accepted alive Link to Nucleotide Sequence:NM_001282613.2Link to Protein Sequence:NP_001269542.1Re-query CCDS DB by Nucleotide ID:NM_001282613Re-query CCDS DB by Protein ID:NP_001269542Link to BLAST:NP_001269542.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269542.1 562 Q8N1M1-6 562 100% 0 0

Chromosomal Locations for CCDS 61192.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 69654907 69655813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69671428 69671579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69672885 69672965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69676916 69677068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69677180 69677257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69678739 69678893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69693674 69693836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1689 nt):
ATGTTCCTCATCTCTAGCAGTGTTCACGGAAGCGACGAGCACGGGCGCCTGCTTAGAAGGACGCTGATGC
GCTACGTCAATCTCACCTCCCTGCTCATCTTTCGCTCGGTGAGCACTGCTGTGTACAAAAGATTTCCCAC
AATGGACCACGTGGTTGAAGCAGGTTTTATGACAACAGATGAAAGGAAATTATTCAACCACCTCAAGTCT
CCTCATCTGAAATATTGGGTTCCATTCATCTGGTTTGGAAATCTTGCAACTAAAGCCCGGAATGAAGGTA
GAATCAGAGACAGTGTTGATCTGCAATCATTGATGACTGAAATGAATCGATACCGCTCTTGGTGCAGCCT
CTTATTCGGTTATGACTGGGTTGGGATTCCGCTGGTTTACACCCAGGTTGTCACTCTTGCTGTCTATACC
TTCTTCTTTGCGTGCCTGATTGGACGCCAGTTTTTGGATCCCACCAAAGGCTACGCAGGGCATGACTTGG
ATCTTTACATTCCCATCTTCACCCTCCTACAATTCTTCTTCTATGCAGGATGGCTTAAGGTAGCAGAGCA
GCTTATCAACCCTTTTGGAGAAGATGATGATGATTTTGAAACTAACTGGTGCATTGACAGAAATTTGCAG
GTCTCTCTTTTAGCTGTGGACGAAATGCACATGAGCTTACCCAAGATGAAGAAGGACATTTACTGGGACG
ATTCTGCTGCTCGCCCACCATACACATTGGCAGCTGCTGACTACTGCATACCCTCATTTCTGGGGTCAAC
AGTCCAGATGGGGCTGTCTGGGTCCGACTTTCCTGACGAGGAGTGGCTGTGGGATTATGAGAAGCATGGC
CATCGGCATTCCATGATAAGAAGAGTCAAGCGGTTCCTGAGTGCCCACGAACACCCCTCCAGCCCCAGAA
GAAGAAGCTACAGGAGGCAGACAAGTGACAGCTCCATGTTCTTACCCCGAGATGACCTCAGCCCAGCCAG
GGACCTACTGGATGTGCCCTCAAGAAACCCCCCCAGGGCCTCACCCACCTGGAAGAAATCCTGCTTCCCA
GAAGGAAGCCCCACGCTGCACTTCAGCATGGGAGAGCTGTCCACCATCAGGGAGACCAGCCAGACAAGCA
CTTTACAGAGCCTGACCCCACAGTCCAGTGTGAGAACTTCCCCCATCAAAATGCCACTGGTACCTGAGGT
ATTGATCACAGCAGCCGAAGCACCAGTGCCCACATCAGGGGGCTACCACCATGATTCCGCTACCTCCATC
TTGAGCTCTGAGTTTACAGGGGTTCAGCCAAGCAAGACTGAGCAGCAGCAGGGCCCCATGGGATCCATCC
TGTCTCCCTCAGAGAAGGAGACACCTCCTGGAGGCCCCAGTCCCCAGACAGTTTCAGCCAGCGCTGAGGA
AAATATATTCAACTGTGAAGAAGACCCTGGTGATACCTTTCTAAAAAGGTGGAGTCTTCCGGGATTCCTG
GGGTCCAGCCACACTTCCCTGGGAAACCTAAGTCCAGACCCCATGAGCTCTCAGCCAGCTCTTTTAATTG
ACACAGAAACATCCTCAGAGATCAGTGGGATCAACATTGTGGCTGGCTCTCGAGTCTCTTCTGATATGCT
GTATTTAATGGAAAACCTGGACACCAAGGAAACAGATATCATAGAGCTGAACAAGGAAACTGAGGAATCA
CCCAAATGA

Translation (562 aa):
MFLISSSVHGSDEHGRLLRRTLMRYVNLTSLLIFRSVSTAVYKRFPTMDHVVEAGFMTTDERKLFNHLKS
PHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPLVYTQVVTLAVYT
FFFACLIGRQFLDPTKGYAGHDLDLYIPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQ
VSLLAVDEMHMSLPKMKKDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHG
HRHSMIRRVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFP
EGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSI
LSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEENIFNCEEDPGDTFLKRWSLPGFL
GSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIVAGSRVSSDMLYLMENLDTKETDIIELNKETEES
PK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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