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Report for CCDS50033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50033.1 Public Mus musculus 17 Baiap3 23 108 98 CCDS HistoryNCBI Gene:545192Re-query CCDS DB by CCDS ID:50033.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50033.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182056.7 ENSMUSP00000138188.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182056.7Link to Ensembl Protein Viewer:ENSMUSP00000138188.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182056Re-query CCDS DB by Protein ID:ENSMUSP00000138188
Original member NCBI NM_001163270.1 NP_001156742.1 Updated not alive Link to Nucleotide Sequence:NM_001163270.1Link to Protein Sequence:NP_001156742.1Re-query CCDS DB by Nucleotide ID:NM_001163270Re-query CCDS DB by Protein ID:NP_001156742
Current member NCBI NM_001163270.2 NP_001156742.1 Accepted alive Link to Nucleotide Sequence:NM_001163270.2Link to Protein Sequence:NP_001156742.1Re-query CCDS DB by Nucleotide ID:NM_001163270Re-query CCDS DB by Protein ID:NP_001156742Link to BLAST:NP_001156742.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156742.1 1150 Q80TT2-2 1150 100% 0 0

Chromosomal Locations for CCDS 50033.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25243638 25243741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25243822 25244027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25244106 25244229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25244309 25244429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25244511 25244591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25244753 25244824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25245137 25245245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25245316 25245395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25245482 25245550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25245639 25245830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25245934 25246026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25246113 25246256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25246330 25246453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25246558 25246688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25246804 25246855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25246958 25247055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25247137 25247193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25247310 25247400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25247484 25247608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25248027 25248147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25248271 25248374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25248472 25248567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25248656 25248763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25249088 25249190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25249315 25249392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25249515 25249559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25250083 25250278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25250393 25250459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25250596 25250655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25251101 25251208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25251438 25251518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25251732 25251819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25252011 25252135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3453 nt):
ATGTCAACCTTGCTGGACATCAAGAGCAGCGTGCTCAGGCAGGTGCAGGTGTGCCCGTCCTTCCGCCGCA
AGACAGAGCAGGAACCTGAGGTCACAAACTCACAGGAGCCCCCCACAGGGGCCTGGAAACCTGGGGATGG
TGTGGAGTTCTTTGCCCACATGCGCCTCATCCTGAAAAAGGGGGATGGCAGACAGGGCCTGCCATGTCCT
GAGGTTCTTCTTCGAAGTGGTTCCCCAGCCCCTGCTGAGCCTGTGGATCCCAATCGTGGCCTGAGAACCC
TGACCCAAGAGGAGGTGGAGATGCTCTATGAGGAGGCTTTATACACAGTCCTCCACCGGGCTGGCACCAT
GGGCCCTGACCAGGTAGATGACGAGGAGGTCTTGCTAAGCTACCTTCAGCAGGTGTTTGGCACCAGTTCT
GAGGAACACATGGAGGCCATCATGCGTGTGAAGAAGGCCAAGGCCCCCACATACGCCCTGAAAGTCTCTG
TCATGCGTGCCAAGAACCTTCTGGCTAAAGACCCCAATGGCTTCAGTGACCCGTACTGTATGCTGGGCAT
CCTGCCTGCCTCAAGTGCCCCCCAGGAGCCCAGTGGGCAGAAGGAGCAGCGCTTTGGCTTCCGAAAGGGC
AGCAAGCGTAGCAGCCCACTGCCTGCCAAGTGTATCCAGGTCACGGAGGTCAAAAACAGCACCCTGAATC
CTGTCTGGAAAGAGCACTTCCTGTTTGAAATTGACGATGTCAACACAGACCAGCTGCACCTGGACATATG
GGACCATGATGATGATGTATCCCTGGCAGAGGCATGCAGGAAGCTAAATGAAGTTATTGGCCTGAAGGGC
ATGACCAGATACTTCAAACAGATTGTCAAGTCGGCCCGTGCAAATGGGACAGCAGGACCCACTGAGGACC
ACACTGATGACTTCCTGGGATGCCTCAACATCCCTATCCGGGAGGTGCCTGTGGCAGGTGCTGACCGCTG
GTTTAAGCTGGAACCACGATCCAGTGCCTCCCGTGTGCAGGGAGACTGCCACCTGGTCCTGAAGCTGATC
ACCACCCAGAGGGACACTGTTATGAGTCAGCGTGGACGCTCGGGCTTCCTGTCCTACCTGTTGCTCCTCA
GCCGTGTGCTGCGGTTTGAGCATCGAGTGGAAGAGCCCAATTCCAGCAGTTGGCGTGGCGAGCTTAGCGG
GCCTGGGACCACAGTCCTCTGTCTGCATGGAGCCCAAAGCAATCTTTCCCCTTTGCAGCTGGCGGTGCTG
CACTGGCAAGTCAGTAGCCGTCACCATCAGACACGGACCCTGGACTATGGGTACCTGCTGGGGCTGCTGG
AAGACGTGCAGGCCCACTGGGAGGAGGCAGCTTCACTGCCCCAGGAGCAGGAGGAGAGCCTGGCTGACAG
CTTTTCTGCCTTCTCGGAGTTCGGGCTGAGGCTGCTGCGCCAGCTCCGAGATTACTTCCCCGCCACCAAC
AGCACGGCTGTGTATCGCCTGGAGCTGCTGCTGAAGTGCCTGGAGAAGCTACAGCTCTTCCAGCCGGCCT
TTGAAATCTGCCCCTTTGAGACAGAGCTCAGCATGGACATTGCTGCTGCCCTGAAGCGGGGCAACCGTGA
GTGGTATGACCAGCTCCTGAACACCAAGAGTCCCCGAGAGCAGCCAGGGCCGCAGCGCCTCGCGGGGCTT
GTTGAGCTTGCAGACATCATCTATGAGGACTTGCAGTTGTGCTATGGGGTCTATGCCAGCCTCTTCCATG
GTATCCTTAAGGTGGACTTCTTCACCCTTACCTTCCGGCAGCTGGAACGTCTGGTGGCTGAGGAGGCATG
GGTGCTGACAGAGGAGCTGAGCCCCAAGATGAACTTAGAGGTGGCCTCGGGGCTCTTTGAGCTCTACCTG
ACCCTGGCAGACACCCAGCGCTTCTGGAGCTGCATCCCTGGACGGGAAAGCCGCTCCCTAGCTCTGGCTG
GCATCCACACCCCATTCCTGCCAGCTGTGAAGCTCTGGCTGCAGGTGCTGCGGGACCAGGCCAAGTGGCG
CCTTCAGGGAGCTGTGGATGTAGACACGCTGGAGCCTGTGGATGCGGCTTCCAAACACAGTAGTTCTGCA
GCTACCGCCAGCCTCTGCCTTAGTCACATTCAGGAGCTCTGGGTCCGCCTGGCTTGGCCTGACCCTTCCC
AGGCCCAGGGGCTAGGCACTCAACTCAGCCAGGACATGTGTGAGGCCTCCCTCTTCTACACGGAACTGCT
GAGGAAGAAGGTGGACACCCAGCCAGGGGCTGCTGGTGAGGCAGTGAGTGAGCAGCTCTGTGTGGTGCTC
AACAACGTGGAGTTGGTGCGCAGAGCTTCGGGGCAGGCACTAAGAGGACTGGCGTGGTCTGAAGGGGCCA
GTGGGCTGGAGGGAGTGCTCCCCCGCCCTCTACTCAGCTGCATACAGGCCCTGGACGAAGACCTCCACCG
GGAGGCCCACACTGTGACAGCACACCTGACTTCCAAGATGGTGGCCGACATCAGGAAGTACATACAGCAC
ATCAGCCTGTCCCCTGACTCGATTCAGAACGATGAGGCTGTAGCCCCACTCCTGAAGTACCTAGATGAGA
AGCTGGCCTTGCTGAATGACGCGCTGGTGAAGGAGAACCTGAACAGGGTGCTGGAGGCCCTCTGGGAGCT
GCTTCTTCAGGCCATTCTGCAGGCGCTGAGTGCAAACAGGGATGTCTCTGCTGATTTCTACGGGCGCTTC
CATTTCACACTGGAGGCCCTGGTCAGTTTCTTCCATGCCGAGGGACAGGGGCTGCCCCTGGAGAACCTGA
GGGATGGAAGCTACAAGAGGCTGCAGGAGGAGCTCCGGCTACACAAATGCTCCACCCGGGAGTGCATCGA
GCAGTTTTACCTGGACAAGCTCAAGCAGAGGTCTCTGGAGCAGAACCGGTTTGGGCGCCTGACTGTCCGG
TGTCATTATGAAGCAGCGGAGCAGCGGCTAGCTGTGGAGGTGCTGCATGCGGCGGACTTACTGCCTCTGG
ATGCCAACGGCCTAAGTGACCCGTTCGTGATTGTGGAGCTTGGTCCACCACACCTCTTCCCACTGGTCCG
CAGCCAGAGGACCCAAGTCAAAGCTCGCACGCTGCACCCCGTGTACGATGAACTCTTCCACTTCTCTGTG
CCTGCTGAGGCGTGCCGCCGCCGCGGGGCCTGCGTGCTGTTCACGGTTATGGACCACGACTGGCTGTCCA
CCAATGACTTTGCTGGGGAAGCAGCCCTTGGTCTGGGTGGCATCAGTGGCATCGCAAGGCCGCATGTGGG
AGGGGGCATGAGGCCAGGTCAGCCTATCACTCTCCACCTGCGCAGGCCCAGAGCTCAGGTGAGGTCTGCA
CTGCGGATGCTAGAAGGCCGCACCAGCAGAGAAGCACAGGAGTTTGTCAAGAAACTCAAGGAGCTGGAGA
AGTGCATGGAGGCGGACCTCTGA

Translation (1150 aa):
MSTLLDIKSSVLRQVQVCPSFRRKTEQEPEVTNSQEPPTGAWKPGDGVEFFAHMRLILKKGDGRQGLPCP
EVLLRSGSPAPAEPVDPNRGLRTLTQEEVEMLYEEALYTVLHRAGTMGPDQVDDEEVLLSYLQQVFGTSS
EEHMEAIMRVKKAKAPTYALKVSVMRAKNLLAKDPNGFSDPYCMLGILPASSAPQEPSGQKEQRFGFRKG
SKRSSPLPAKCIQVTEVKNSTLNPVWKEHFLFEIDDVNTDQLHLDIWDHDDDVSLAEACRKLNEVIGLKG
MTRYFKQIVKSARANGTAGPTEDHTDDFLGCLNIPIREVPVAGADRWFKLEPRSSASRVQGDCHLVLKLI
TTQRDTVMSQRGRSGFLSYLLLLSRVLRFEHRVEEPNSSSWRGELSGPGTTVLCLHGAQSNLSPLQLAVL
HWQVSSRHHQTRTLDYGYLLGLLEDVQAHWEEAASLPQEQEESLADSFSAFSEFGLRLLRQLRDYFPATN
STAVYRLELLLKCLEKLQLFQPAFEICPFETELSMDIAAALKRGNREWYDQLLNTKSPREQPGPQRLAGL
VELADIIYEDLQLCYGVYASLFHGILKVDFFTLTFRQLERLVAEEAWVLTEELSPKMNLEVASGLFELYL
TLADTQRFWSCIPGRESRSLALAGIHTPFLPAVKLWLQVLRDQAKWRLQGAVDVDTLEPVDAASKHSSSA
ATASLCLSHIQELWVRLAWPDPSQAQGLGTQLSQDMCEASLFYTELLRKKVDTQPGAAGEAVSEQLCVVL
NNVELVRRASGQALRGLAWSEGASGLEGVLPRPLLSCIQALDEDLHREAHTVTAHLTSKMVADIRKYIQH
ISLSPDSIQNDEAVAPLLKYLDEKLALLNDALVKENLNRVLEALWELLLQAILQALSANRDVSADFYGRF
HFTLEALVSFFHAEGQGLPLENLRDGSYKRLQEELRLHKCSTRECIEQFYLDKLKQRSLEQNRFGRLTVR
CHYEAAEQRLAVEVLHAADLLPLDANGLSDPFVIVELGPPHLFPLVRSQRTQVKARTLHPVYDELFHFSV
PAEACRRRGACVLFTVMDHDWLSTNDFAGEAALGLGGISGIARPHVGGGMRPGQPITLHLRRPRAQVRSA
LRMLEGRTSREAQEFVKKLKELEKCMEADL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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