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Report for CCDS10071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10071.1 Public Homo sapiens 15 INO80 24 110 108 CCDS HistoryNCBI Gene:54617Re-query CCDS DB by CCDS ID:10071.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648947.1 ENSP00000497609.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648947.1Link to Ensembl Protein Viewer:ENSP00000497609.1Re-query CCDS DB by Nucleotide ID:ENST00000648947Re-query CCDS DB by Protein ID:ENSP00000497609
Original member Current member NCBI NM_017553.3 NP_060023.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017553.3Link to Protein Sequence:NP_060023.1Re-query CCDS DB by Nucleotide ID:NM_017553Re-query CCDS DB by Protein ID:NP_060023Link to BLAST:NP_060023.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060023.1 1556 Q9ULG1 1556 100% 0 0

Chromosomal Locations for CCDS 10071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 40980223 40980440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40982862 40983077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40983762 40983921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40984197 40984352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40985338 40985426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40987091 40987193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40987816 40987974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40997529 40997601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41005593 41005687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41016088 41016215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41020900 41021125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41027596 41027736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41044904 41045075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41047408 41047501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41048212 41048276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41049287 41049420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41049935 41050102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41053929 41054014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41055247 41055364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41056622 41056706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41058639 41058781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41059867 41059926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41069570 41069665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41070467 41070547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41071849 41072058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41073428 41073495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41074370 41074565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41079701 41079904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41081020 41081073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41085369 41085583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41087562 41087682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41092027 41092182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41095601 41095668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41095759 41095928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41096168 41096310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4671 nt):
ATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGT
ACTTGGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATATTTC
TAGTGATGACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATA
CAAGTTAAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAA
ACACATATTCTCTGAATGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTC
TAAGCTGAAGAAAAGCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCT
CAGAGTGAAGACGATGATGAAGAAGAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTAC
ACAAATATAAGAAACTTCACCAAAATAAGTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAG
TGCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAG
AAATTTAAGGAGGAAAAGAAACTTAAAGCTAAGTTGAAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAG
AACTTTCCTCTGAAGAATCCCCTCGTCGCCATCACCACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGA
TGCACCTCCCCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTA
TGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTTCAGCTCGTAACCTGTTTC
TCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTCGAGCTGCCTTGCAGGCCCAGAA
GAACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGTACTGGAAGAAATAT
GAGAAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGGAGCAGCGGAAGTTGGATGAGG
AAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCA
TTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGAAGAC
AGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGGATTATGATA
GTAACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGGACAAG
GTCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGGG
TTTGGGGAGAGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTT
TTAATGGCAAATTGAAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTAT
TAATGGCATTCTTGCTGATGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTG
GCTGAGAGAGAGAACATTTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACC
AGGAGTTTACTAGATTTGTTCCTAAATTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGT
CATCAGAAGGTTCTGGAGTCAGAAGACCCTCTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGC
TATCAGCTGGTGGTGCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGG
CTCAGGCGCTCAAGAGTAGTTCCAGTGTTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT
TTTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTGCTGCATTTCATTATGCCA
ACATTATTTGATTCACATGAGGAATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCATGCCGAAAACA
AATCTGCTATTGATGAGAATCAACTTTCTCGCTTACACATGATTTTGAAGCCATTTATGCTGAGGAGAAT
CAAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATTCTAATGTATTGCCAACTGACCAGCCGA
CAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGATTTATTGCAGTCTTCTATGGGCT
CTACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTGTAA
TCACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTAAAGCCATACCACATT
TCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTGGTTAAGGGTTC
TTTCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAGAAAGCTG
TTTCTCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
GCCAGATGGTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAG
CGCCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACT
CTCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTG
AGTGGCTACTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCA
CTGAGCTGCCATCTTTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAA
TGACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTG
TTGAATGGGGCCCCTGAACTGGCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTG
GAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTCAT
CACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTC
CTTATCTACTCCCAGATGACCAGGATGATAGACCTACTGGAGGAATACATGGTTTACAGGAAGCATACCT
ACATGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGAA
TGACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGGTATCAATCTCACTGCTGCAGACACA
GTGATTTTCTATGATAGCGACTGGAACCCCACTGTGGACCAGCAGGCCATGGACAGGGCCCACCGCTTAG
GGCAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAG
AGCCAAGGAGAAGAGTGAGATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAACCAGATACCTTGAAA
CCCAAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCGGCAGGAAG
AGAAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGAA
GAAGAAAAAAGAAGATGAATTGGATGGGAAAAGGAGAAAAGAGGGTGTGAACCTGGTGATCCCATTTGTT
CCCTCGGCTGATAACTCCAACCTCTCTGCTGACGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGC
CAAGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAG
CAGTGACATGCTGGTCATTGTGGATGACCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAACTCTCCC
GCATCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGAC
GTGGTCACTCAGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAAGGAGCAGGGAAGGG
CCGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCC
TCTGCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAAGGAATCTCCGCCAGCAGTCCTCTGCAGA
CATCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCC
TTTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGAC
TCTCTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAA

Translation (1556 aa):
MASELGARDDGGCTELAKPLYLQYLERALRLDHFLRQTSAIFNRNISSDDSEDGLDDSNPLLPQSGDPLI
QVKEEPPNSLLGETSGAGSSGMLNTYSLNGVLQSESKCDKGNLYNFSKLKKSRKWLKSILLSDESSEADS
QSEDDDEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQYQYYSAGLLSTYDPFYEQQRHLLGPKKK
KFKEEKKLKAKLKKVKKKRRRDEELSSEESPRRHHHQTKVFAKFSHDAPPPGTKKKHLSIEQLNARRRKV
WLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARRLTKEMLLYWKKY
EKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEILRKLED
SSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAYHIHQARTRSFDEDAKESRAAALRAANKSGTG
FGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL
AERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS
YQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMP
TLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSR
QKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYHI
SKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLL
ARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAV
SGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCL
LNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRV
LIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADT
VIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK
PKEVVSLLLDDEELEKKLRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFV
PSADNSNLSADGDDSFISVDSAMPSPFSEISISSELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSP
ASITGSVSDTVNGISIQEMPAAGRGHSARSRGRPKGSGSTAKGAGKGRSRKSTAGSAAAMAGAKAGAAAA
SAAAYAAYGYNVSKGISASSPLQTSLVRPAGLADFGPSSASSPLSSPLSKGNNVPGNPKNLHMTSSLAPD
SLVRKQGKGTNPSGGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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