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Report for CCDS7489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7489.1 Public Homo sapiens 10 CWF19L1 24 110 108 CCDS HistoryNCBI Gene:55280Re-query CCDS DB by CCDS ID:7489.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354105.10 ENSP00000326411.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354105.10Link to Ensembl Protein Viewer:ENSP00000326411.6Re-query CCDS DB by Nucleotide ID:ENST00000354105Re-query CCDS DB by Protein ID:ENSP00000326411
Original member Current member NCBI NM_018294.6 NP_060764.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018294.6Link to Protein Sequence:NP_060764.3Re-query CCDS DB by Nucleotide ID:NM_018294Re-query CCDS DB by Protein ID:NP_060764Link to BLAST:NP_060764.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060764.3 538 Q69YN2-1 538 100% 0 0

Chromosomal Locations for CCDS 7489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 100233227 100233371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100235667 100235764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100236850 100236969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100238022 100238231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100243698 100243777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100245799 100245913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100246795 100246935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100250248 100250332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100253421 100253539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100256262 100256476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100260218 100260319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100260966 100261044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100261979 100262063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 100267571 100267593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGGCACAGAAACCGCTGCGCCTCTTGGCTTGTGGAGATGTTGAAGGAAAGTTTGATATTTTATTCAATA
GAGTTCAAGCAATTCAGAAGAAAAGTGGAAACTTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTC
CACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGCTCCTATTCAGACATATGTGCTT
GGTGCTAATAACCAGGAAACAGTAAAATATTTCCAGGATGCTGATGGATGTGAATTAGCTGAAAACATTA
CTTATCTGGGTCGTAAAGGTATCTTCACTGGAAGCTCGGGGCTGCAGATTGTGTACCTCAGTGGGACAGA
ATCCTTAAATGAGCCAGTACCAGGTTATAGTTTTAGTCCCAAGGATGTGTCTTCTCTGAGAATGATGCTG
TGTACAACCTCCCAGTTTAAGGGTGTTGATATCTTGCTCACATCCCCATGGCCCAAGTGTGTGGGGAACT
TTGGGAATTCTTCTGGAGAAGTGGATACCAAAAAATGTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGG
CTTGAAACCAAGATACCATTTTGCTGCTTTGGAAAAGACCTATTATGAGAGGCTTCCATATCGAAACCAT
ATCATTCTACAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCAGAAA
AGAAAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGAAGCTAATGGATGCAGCAGAACTGGTAAAACA
GCCTCCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGAAAGCAAATTCTT
GCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGGGAAGGAAGCGTTCAT
CCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAACCTCCTCAGCCTCCAGGACC
CTGCTGGTTTTGCCTTGCTAGCCCTGAAGTGGAAAAACATTTGGTGGTCAACATCGGCACACATTGCTAC
CTTGCCCTGGCCAAAGGAGGCTTATCTGATGACCATGTCCTCATCCTGCCTATTGGACACTACCAGTCAG
TGGTGGAGCTTTCAGCAGAGGTGGTAGAAGAGGTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAA
GAGTCGAGGGAAATGGTGTGTTGTATTTGAGAGAAATTATAAGAGCCATCACCTCCAGCTACAGGTCATT
CCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGC
AGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCAGGAGCAGCATATTT
TTATGTTGAACTTGACACAGGAGAAAAGCTTTTCCACAGAATTAAAAAGAATTTTCCTTTGCAGTTTGGA
AGGGAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTGTCAGATCA
GCAAGGAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGACTTTACTCTGGA
TGACTAA

Translation (538 aa):
MAQKPLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDAEWEEYKTGIKKAPIQTYVL
GANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIVYLSGTESLNEPVPGYSFSPKDVSSLRMML
CTTSQFKGVDILLTSPWPKCVGNFGNSSGEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNH
IILQENAQHATRFIALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQIL
APVEESACQFFFDLNEKQGRKRSSTGRDSKSSPHPKQPRKPPQPPGPCWFCLASPEVEKHLVVNIGTHCY
LALAKGGLSDDHVLILPIGHYQSVVELSAEVVEEVEKYKATLRRFFKSRGKWCVVFERNYKSHHLQLQVI
PVPISCSTTDDIKDAFITQAQEQQIELLEIPEHSDIKQIAQPGAAYFYVELDTGEKLFHRIKKNFPLQFG
REVLASEAILNVPDKSDWRQCQISKEDEETLARRFRKDFEPYDFTLDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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