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Report for CCDS70844.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70844.1 Public Mus musculus 17 Fez2 23 108 98 CCDS HistoryNCBI Gene:225020Re-query CCDS DB by CCDS ID:70844.1Re-query CCDS DB by GeneID:225020See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70844.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112487.2 ENSMUSP00000108106.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112487.2Link to Ensembl Protein Viewer:ENSMUSP00000108106.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112487Re-query CCDS DB by Protein ID:ENSMUSP00000108106
Original member Current member NCBI NM_001285940.1 NP_001272869.1 Accepted alive Link to Nucleotide Sequence:NM_001285940.1Link to Protein Sequence:NP_001272869.1Re-query CCDS DB by Nucleotide ID:NM_001285940Re-query CCDS DB by Protein ID:NP_001272869Link to BLAST:NP_001272869.1

Chromosomal Locations for CCDS 70844.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 78378729 78378745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78381608 78381673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78384744 78384819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78386991 78387071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78400630 78400898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78402740 78402881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78404728 78404844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78412864 78412972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78417833 78418083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGCGGCTGACGGGGACTGGCAGGATTTCTATGAGTTCCAGGAGCCGGCCGGGAGTGTCCAGGAACAGG
AGAACTGTAACGCGAGCCCGGAGGCTGGCGCGGGGGCACACGCGGGCGGCGACAGCTTCCCGGCGCTGGC
TTCCAGCCTGGAGGAGAAGCTGAGCCTGTGCTTCCGCCCCACGTCGGAGGCCGAGCCCCCACGGGCGGCC
GTGCGGCCCATCACGGAGTGCAGCCTCCTGCAAGGGGACGAGATTTGGAATGCCCTGACAGATAACTATG
GGAATGTCATGCCTGTAGACTGGAAGTCGTCCCATACAAGGACCTTGCATTTGCTTACTCTGAACCTCTC
GGAGAAAGGGATGAACGACGGCTTGCTCTTTGACGCCTCGGATGAGGAGGAGCTGAGGGAGCAGTTGGAC
ATGCATTCGATCATTGTCTCCTGTGTCAACGAAGAGCCTCTCTTCACTGCAGACCAGGTGATTGAAGAAA
TTGAAGAAATGATGCAGGAGTCACCAGACCCAGAAGACGACGAGACCCCCACACAGTCAGACCGGCTCTC
TATGCTCTCCCAGGAGATTCAGACTCTCAAGAGGTCTAGCATGAGCAGCTATGAAGAGCGAGTGAAAAGG
CTGTCGGTGTCTGAGCTAAACGAACTGCTGGAAGAGATCGAGGCAGCCATTAAGCAGTACTCTGAGGAGC
TGGTGCAGCAGCTGGCCCTGCGAGATGAACTCGAGTTCGAGAAGGAAGTGGAAAACAGCTTCATTTCCGC
TCTGATTGAGGTGCAGAACAAGCAGAAAGAACACAAAGAGACAGCCAAGAAGAAGAAGAAGCTCAAAAGT
GGCAGCTCTCAGAACGGGAGGAGTGAGAGAAGTCACATGCCGGGCACACGCTTCAGCATGGAAGGGATCT
CAAATGTCATTCAGAATGGCCTCCGCCACACCTTTGGAAACTCAGGCGGAGAGAAACAGTATCTGACGAC
AGTCATCCCTTACGAGAAGAAGAGTGGCCCGCCGTCCGTGGAAGATCTTCAGATACTAACCAAAATCCTG
CATGCCATGAAGGAGGACAGTGAGAAAGTTCCAAGCTTGTTAACCGACTATATACTGAAAGTTCTGTGTC
CGACATAG

Translation (375 aa):
MAADGDWQDFYEFQEPAGSVQEQENCNASPEAGAGAHAGGDSFPALASSLEEKLSLCFRPTSEAEPPRAA
VRPITECSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLNLSEKGMNDGLLFDASDEEELREQLD
MHSIIVSCVNEEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSMSSYEERVKR
LSVSELNELLEEIEAAIKQYSEELVQQLALRDELEFEKEVENSFISALIEVQNKQKEHKETAKKKKKLKS
GSSQNGRSERSHMPGTRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKSGPPSVEDLQILTKIL
HAMKEDSEKVPSLLTDYILKVLCPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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