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Report for CCDS69618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69618.1 Public Homo sapiens 9 CENPP 24 110 108 CCDS HistoryNCBI Gene:401541Re-query CCDS DB by CCDS ID:69618.1Re-query CCDS DB by GeneID:401541See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69618.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375579.7 ENSP00000364729.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375579.7Link to Ensembl Protein Viewer:ENSP00000364729.3Re-query CCDS DB by Nucleotide ID:ENST00000375579Re-query CCDS DB by Protein ID:ENSP00000364729
Original member Current member NCBI NM_001286971.1 NP_001273900.1 Accepted alive Link to Nucleotide Sequence:NM_001286971.1Link to Protein Sequence:NP_001273900.1Re-query CCDS DB by Nucleotide ID:NM_001286971Re-query CCDS DB by Protein ID:NP_001273900Link to BLAST:NP_001273900.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273900.1 115 Q6IPU0-2 115 100% 0 0

Chromosomal Locations for CCDS 69618.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 92600464 92600508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92611314 92611393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92612523 92612614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92613019 92613149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGGAGGCTCCCAGCTGGTCTGTTCTGCAAAGGTCTGGAGATGAGGAAAAGTACCCAGATGCCGTGTACC
TCTCGGAGGGGCCCTCCTCCTGCTCCATGGGGATCCGCAGCGCCAGCCGGCCAGGGTTTGAATTAGTCAT
TGTTTGGAGGATACAAATAGATGAAGATGGGAAGGTTTTTCCAAAGCTGGATCTTCTCACCAAAGTCCCA
CAGCGAGCCCTGGAGCTGGACAAGAACAGAGCCATAGAAACTGCTCCTCTCAGCTTCCGAACCCTGGTAG
GACTGCTTGGAATCGAAGCTGCTCTGGAAAGCCTGATAAAATCGCTTTGTGCAGAGGAGAACAACTAG

Translation (115 aa):
MEAPSWSVLQRSGDEEKYPDAVYLSEGPSSCSMGIRSASRPGFELVIVWRIQIDEDGKVFPKLDLLTKVP
QRALELDKNRAIETAPLSFRTLVGLLGIEAALESLIKSLCAEENN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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