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Report for CCDS841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
841.1 Public Homo sapiens 1 INKA2 24 110 108 CCDS HistoryNCBI Gene:55924Re-query CCDS DB by CCDS ID:841.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357260.6 ENSP00000349805.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357260.6Link to Ensembl Protein Viewer:ENSP00000349805.5Re-query CCDS DB by Nucleotide ID:ENST00000357260Re-query CCDS DB by Protein ID:ENSP00000349805
Original member Current member NCBI NM_019099.5 NP_061972.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019099.5Link to Protein Sequence:NP_061972.1Re-query CCDS DB by Nucleotide ID:NM_019099Re-query CCDS DB by Protein ID:NP_061972Link to BLAST:NP_061972.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061972.1 297 Q9NTI7 297 100% 0 0

Chromosomal Locations for CCDS 841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 111726968 111727804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111739186 111739242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGACGATGGAGAGCAGGGAAATGGACTGCTATCTCCGTCGCCTCAAACAGGAGCTGATGTCCATGAAGG
AGGTGGGTGATGGCTTACAGGATCAGATGAACTGCATGATGGGTGCACTGCAAGAACTGAAGCTCCTCCA
GGTGCAGACAGCACTGGAACAGCTGGAGATCTCTGGAGGGGGTCCTGTGCCAGGCAGCCCTGAAGGTCCC
AGGACCCAGTGCGAGCACCCTTGTTGGGAGGGTGGCAGAGGTCCTGCCAGGCCCACAGTCTGTTCCCCCT
CCAGTCAACCTTCTCTTGGCAGCAGCACCAAGTTTCCATCCCATAGGAGTGTCTGTGGAAGGGATTTAGC
CCCCTTGCCCAGGACACAGCCACATCAAAGCTGTGCTCAGCAGGGGCCAGAGCGAGTGGAACCGGATGAC
TGGACCTCCACGTTGATGTCCCGGGGCCGGAATCGACAGCCTCTGGTGTTAGGGGACAACGTTTTTGCAG
ACCTGGTGGGCAATTGGCTAGACTTGCCAGAACTGGAGAAGGGTGGGGAGAAGGGTGAGACTGGGGGGGC
ACGTGAACCCAAAGGAGAGAAAGGCCAGCCCCAGGAGCTGGGCCGCAGGTTCGCCCTGACAGCAAACATC
TTTAAGAAGTTCTTGCGTAGTGTGCGGCCTGACCGTGACCGGCTGCTGAAGGAGAAGCCAGGCTGGGTGA
CACCCATGGTCCCTGAGTCCCGAACCGGCCGCTCACAGAAGGTCAAGAAGCGGAGCCTTTCCAAGGGCTC
TGGACATTTCCCCTTCCCAGGCACCGGGGAGCACAGGCGAGGGGAGAATCCCCCCACAAGCTGCCCCAAG
GCCCTGGAGCACTCACCCTCAGGATTTGATATTAACACAGCTGTTTGGGTCTGA

Translation (297 aa):
MTMESREMDCYLRRLKQELMSMKEVGDGLQDQMNCMMGALQELKLLQVQTALEQLEISGGGPVPGSPEGP
RTQCEHPCWEGGRGPARPTVCSPSSQPSLGSSTKFPSHRSVCGRDLAPLPRTQPHQSCAQQGPERVEPDD
WTSTLMSRGRNRQPLVLGDNVFADLVGNWLDLPELEKGGEKGETGGAREPKGEKGQPQELGRRFALTANI
FKKFLRSVRPDRDRLLKEKPGWVTPMVPESRTGRSQKVKKRSLSKGSGHFPFPGTGEHRRGENPPTSCPK
ALEHSPSGFDINTAVWV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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