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Report for CCDS23182.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23182.1 Public Mus musculus 9 Poglut3 23 108 98 CCDS HistoryNCBI Gene:68304Re-query CCDS DB by CCDS ID:23182.1Re-query CCDS DB by GeneID:68304See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23182.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037853.4 ENSMUSP00000039313.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037853.4Link to Ensembl Protein Viewer:ENSMUSP00000039313.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000037853Re-query CCDS DB by Protein ID:ENSMUSP00000039313
Original member Current member NCBI NM_212445.2 NP_997610.1 Accepted alive Link to Nucleotide Sequence:NM_212445.2Link to Protein Sequence:NP_997610.1Re-query CCDS DB by Nucleotide ID:NM_212445Re-query CCDS DB by Protein ID:NP_997610Link to BLAST:NP_997610.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997610.1 503 G5E897 503 100% 0 0

Chromosomal Locations for CCDS 23182.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 53384100 53384286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53388380 53388577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53390435 53390721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53391915 53392131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53393936 53394132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53395844 53396038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53397920 53398024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 53399687 53399812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGCAGGCCCTGCCGCTGGGGCTGCAGCTCGCCCTGCTGGTGGCGGCGGGGGCCGGGGCGCGCGTGAGCG
CACCGCGGAGCCTGGCGTGGGGCCCTGGGTTGCAGGCCGCCGCCGTCCTGCCCGTGCGCTACTTCTTCCT
GCAGTCGGTGGACTCGGACGGCCGGAACTTCACTAGCTCGCCGCCAGGTCAAACACAGTTCAAAGTAGTG
GTAAAATCCCTTTCACCTAAAGAGCTGGTCCGTATTTATGTCCCTAAACCTTTGGACAGAAATGATGGAA
CGTTTTTGGTGAGATACAGGATGCACGAGACGGCCCATAAAGGGCTCAAGATAGAGATCCTTCATGGCAG
TGAACATGTGGCTCACTCTCCCTATATTTTAAAAGGACCCGTGTACCACGAGTACTGTGACTGCCCGGAA
GATGACCCTCAGGTCTGGCAGGAAACCCTGTCTTGTCCAGCCAGTGAACCACAGATCGAGCAGGATTTTG
TTTCCTTCCCCAGCATTAATCTCCAGCAGATGCTGAAGGAGGTCCCCACAAGATTTGGGGACGAGCGGGG
TGCTGTTGTTCATTACACAATTCTCAATAACCACATCTACCGGAGATCTTTGGGGAAATACACAGACTTC
AAAATGTTCTCTGATGAAATTTTGCTGTCACTGGCAAGAAAGGTCACCCTCCCAGATTTAGAATTTTATA
TCAACCTTGGAGATTGGCCCTTGGAGCATCGAAAAGTCAATGACACCCCAGGCCCTATACCTATCATTTC
CTGGTGTGGCTCCTTGGACTCAAGAGACATTATCCTTCCAACATATGATGTCACCCACTCCACACTCGAA
GCAATGAGGGGTGTCACAAATGATCTCCTCTCCGTTCAGGGAAACACAGGGCCTTCATGGATCAATAAAA
CAGAGAAAGCTTTCTTCCGAGGTAGAGATAGCCGGGAGGAGAGGCTGCAGTTGGTACTTCTGTCCAAAGA
AAATCCACAGCTGCTAGATGCAGGAATTACAGGATATTTCTTTTTCCAAGAGAAAGAAAAAGAGCTTGGA
AAAGCCAAGTTGATGGGTTTCTTTGATTTCTTTAAGTACAAGTACCAAGTGAACGTGGACGGGACTGTGG
CCGCCTACAGGTATCCGTACCTCATGCTGGGCGACAGCCTGGTCCTCAAGCAGGAGTCACCATACTACGA
ACATTTCTATGTGGCACTAAAGCCTTGGAAACACTACGTTCCCATTAAGAGAAACCTCGGTGATTTACTA
GAGAAAGTGAAATGGGCCAAGGAAAATGATGAAGAAGCAAAGAAGATTGCGAAAGAAGGGCAGTTAACTG
CCAGGGACCTGCTCCAGCCGCCCAGGCTTTACTGCTACTATTACAGAGTACTGCAGAAATATGCCGAGCG
CCAGGCCAGCAAGCCCATGATTCGTGATGGAATGGAGCTTGTTCCCCAGCCGGATGATGGCACATCCATC
TGCCAGTGCCACCGGAGGAGGCCTGAGAGGGAAGAGCTTTGA

Translation (503 aa):
MQALPLGLQLALLVAAGAGARVSAPRSLAWGPGLQAAAVLPVRYFFLQSVDSDGRNFTSSPPGQTQFKVV
VKSLSPKELVRIYVPKPLDRNDGTFLVRYRMHETAHKGLKIEILHGSEHVAHSPYILKGPVYHEYCDCPE
DDPQVWQETLSCPASEPQIEQDFVSFPSINLQQMLKEVPTRFGDERGAVVHYTILNNHIYRRSLGKYTDF
KMFSDEILLSLARKVTLPDLEFYINLGDWPLEHRKVNDTPGPIPIISWCGSLDSRDIILPTYDVTHSTLE
AMRGVTNDLLSVQGNTGPSWINKTEKAFFRGRDSREERLQLVLLSKENPQLLDAGITGYFFFQEKEKELG
KAKLMGFFDFFKYKYQVNVDGTVAAYRYPYLMLGDSLVLKQESPYYEHFYVALKPWKHYVPIKRNLGDLL
EKVKWAKENDEEAKKIAKEGQLTARDLLQPPRLYCYYYRVLQKYAERQASKPMIRDGMELVPQPDDGTSI
CQCHRRRPEREEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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