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Report for CCDS75297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75297.1 Public Homo sapiens 5 CCNI2 24 110 108 CCDS HistoryNCBI Gene:645121Re-query CCDS DB by CCDS ID:75297.1Re-query CCDS DB by GeneID:645121See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 75297.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000614847.1 ENSP00000478257.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614847.1Link to Ensembl Protein Viewer:ENSP00000478257.1Re-query CCDS DB by Nucleotide ID:ENST00000614847Re-query CCDS DB by Protein ID:ENSP00000478257
Original member Current member NCBI NM_001287252.2 NP_001274181.1 Accepted alive Link to Nucleotide Sequence:NM_001287252.2Link to Protein Sequence:NP_001274181.1Re-query CCDS DB by Nucleotide ID:NM_001287252Re-query CCDS DB by Protein ID:NP_001274181Link to BLAST:NP_001274181.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001274181.1 385 Q6ZMN8-2 385 100% 0 0

Chromosomal Locations for CCDS 75297.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132747496 132747924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132748347 132748475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132749348 132749422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132750857 132750997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132751918 132752196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132752866 132752970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGGCCTCGGGCGCTCAGCTCCCGCCGCAGCCGTCGAGCTCAGAGGTCAGCGCCGTCCAGAGCCCAGGCG
GGCGTCCCGGCGCCGGTCTGGAGGAAACAGCCCTGGGCGTTCCTCTCCCGCCGTCTCCGGGGGAGGCCCC
TCTGCCCCGAAGCAACCGGAGCAGGTGCCCTGGGACCCGCCAGCCCGGAGCGGCCTCCCTCCACGCGGCG
TCCGCAGCAGTCCCCGTGCGGCCCCGGCGCGGTACGGCGCCAGCCGGGAAAACCGCAGACGCGGTCCCCG
CCGCCGCCCCAGAGCAAGCTCCGCGGCCGGCTCCACAGTCCCGCAAGCCGCGCAACCTGGAAGGCGACCT
GGACGAGCGCCGGCTGCTCTGCCACTTGCAGCTGGCCCAGGACCGCGAGGCGCGCCTGTGGCGGGGCGGC
AAACCCCAGGATGAAATCTGCGACGCCTTCGAGGAAGTCGTGCTGTGGCTCCTGCGGCTTCAGAACACCT
TTTACTTCTCCCAGTCCACTTTTAACCTGGCCCTCACCATCTTTGGCCGCCTCCTGATTTCAGTGAAGGT
AAAAGAGAAATACCTGCATTGCGCCACAATTACTTCCTTGAGGCTCGCTGCAAAAGTTAATGAAGAAGAG
GAGTTTATTCCACAAGTAAAAGACTTCACAAAGCACTATGGCTCTGACTATTCCCCGAATGAGCTGCTGA
GGATGGAGCTGGCTATTCTGGACAGACTGCACTGGGACCTCTATATTGGGACGCCGCTGGACTTCTTGAC
TATAGAAAAGTATGGCGTTTTCTGTTCTAACATTAAAAACCATGGTCTCCAGTTCCATGCCCTGGTGGTC
CTGAGCTGGCCCCATGTGTTGGAGCTGCTGCCTCAGAGGAATCCTTCCCTCCACGTCGCATCCCTGACCA
GGCAGCTGCAGCACTGTATGGCGGGCCACCAGCTGCTGCAGTTCAAGGGCTCCACACTGGCCTTGGTCAT
CATCACCTTAGAGCTGGAGAGGCTCATGCCCGGCTGGTGTGCTCCTATATCTGATCTGCTAAAGAAAGCA
CAGGTTGGTGATATGCAGTACAGCTGCTGCAAGGAACTTGTAATGCAGCAACTGAGAAGTCTTCAGTCAT
CCTCCTGCACAGACAACTTTGTGTCACCTGCCAACTAG

Translation (385 aa):
MASGAQLPPQPSSSEVSAVQSPGGRPGAGLEETALGVPLPPSPGEAPLPRSNRSRCPGTRQPGAASLHAA
SAAVPVRPRRGTAPAGKTADAVPAAAPEQAPRPAPQSRKPRNLEGDLDERRLLCHLQLAQDREARLWRGG
KPQDEICDAFEEVVLWLLRLQNTFYFSQSTFNLALTIFGRLLISVKVKEKYLHCATITSLRLAAKVNEEE
EFIPQVKDFTKHYGSDYSPNELLRMELAILDRLHWDLYIGTPLDFLTIEKYGVFCSNIKNHGLQFHALVV
LSWPHVLELLPQRNPSLHVASLTRQLQHCMAGHQLLQFKGSTLALVIITLELERLMPGWCAPISDLLKKA
QVGDMQYSCCKELVMQQLRSLQSSSCTDNFVSPAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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