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Report for CCDS25481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25481.1 Public Mus musculus 11 Sost 23 108 98 CCDS HistoryNCBI Gene:74499Re-query CCDS DB by CCDS ID:25481.1Re-query CCDS DB by GeneID:74499See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25481.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001534.6 ENSMUSP00000001534.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001534.6Link to Ensembl Protein Viewer:ENSMUSP00000001534.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000001534Re-query CCDS DB by Protein ID:ENSMUSP00000001534
Original member Current member NCBI NM_024449.6 NP_077769.4 Accepted alive Link to Nucleotide Sequence:NM_024449.6Link to Protein Sequence:NP_077769.4Re-query CCDS DB by Nucleotide ID:NM_024449Re-query CCDS DB by Protein ID:NP_077769Link to BLAST:NP_077769.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077769.4 211 Q99P68 211 100% 0 0

Chromosomal Locations for CCDS 25481.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101963846 101964267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101966760 101966973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGCAGCCCTCACTAGCCCCGTGCCTCATCTGCCTACTTGTGCACGCTGCCTTCTGTGCTGTGGAGGGCC
AGGGGTGGCAAGCCTTCAGGAATGATGCCACAGAGGTCATCCCAGGGCTTGGAGAGTACCCCGAGCCTCC
TCCTGAGAACAACCAGACCATGAACCGGGCGGAGAATGGAGGCAGACCTCCCCACCATCCCTATGACGCC
AAAGATGTGTCCGAGTACAGCTGCCGCGAGCTGCACTACACCCGCTTCCTGACAGACGGCCCATGCCGCA
GCGCCAAGCCGGTCACCGAGTTGGTGTGCTCCGGCCAGTGCGGCCCCGCGCGGCTGCTGCCCAACGCCAT
CGGGCGCGTGAAGTGGTGGCGCCCGAACGGACCGGATTTCCGCTGCATCCCGGATCGCTACCGCGCGCAG
CGGGTGCAGCTGCTGTGCCCCGGGGGCGCGGCGCCGCGCTCGCGCAAGGTGCGTCTGGTGGCCTCGTGCA
AGTGCAAGCGCCTCACCCGCTTCCACAACCAGTCGGAGCTCAAGGACTTCGGGCCGGAGACCGCGCGGCC
GCAGAAGGGTCGCAAGCCGCGGCCCGGCGCCCGGGGAGCCAAAGCCAACCAGGCGGAGCTGGAGAACGCC
TACTAG

Translation (211 aa):
MQPSLAPCLICLLVHAAFCAVEGQGWQAFRNDATEVIPGLGEYPEPPPENNQTMNRAENGGRPPHHPYDA
KDVSEYSCRELHYTRFLTDGPCRSAKPVTELVCSGQCGPARLLPNAIGRVKWWRPNGPDFRCIPDRYRAQ
RVQLLCPGGAAPRSRKVRLVASCKCKRLTRFHNQSELKDFGPETARPQKGRKPRPGARGAKANQAELENA
Y


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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