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Report for CCDS22703.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22703.1 Public Mus musculus 8 Mlycd 23 108 98 CCDS HistoryNCBI Gene:56690Re-query CCDS DB by CCDS ID:22703.1Re-query CCDS DB by GeneID:56690See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22703.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098367.4 ENSMUSP00000095970.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098367.4Link to Ensembl Protein Viewer:ENSMUSP00000095970.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000098367Re-query CCDS DB by Protein ID:ENSMUSP00000095970
Original member Current member NCBI NM_019966.3 NP_064350.2 Accepted alive Link to Nucleotide Sequence:NM_019966.3Link to Protein Sequence:NP_064350.2Re-query CCDS DB by Nucleotide ID:NM_019966Re-query CCDS DB by Protein ID:NP_064350Link to BLAST:NP_064350.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064350.2 492 Q99J39-1 492 100% 0 0

Chromosomal Locations for CCDS 22703.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 119394946 119395470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119401481 119401593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119402434 119402590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119407556 119407705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 119409988 119410521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGCGAGGCCTCGGGCCAGGCTTGAGGGCTCGGCGCCTGCTCCCACTGCGGTCCCCGCCGCGGCCTCCGG
GGCCCCGGGGACGTCGGCTGTGCGGCGGGCTCGCGGCCAGCGCCATGGACGAGCTGCTGCGGCGAGCCGT
GCCCCCGACGCCGGCCTACGAGCTGCGCGAGAAGACGCCGGCGCCCGCCGAGGGCCAGTGCGCCGACTTC
GTGAGCTTCTACGGCGGCCTGGCCGAGGCGTCCCAGCGCGCCGAGCTGCTCGGCCGCCTGGCTCAGGGCT
TCGGCGTGGACCACGGCCAGGTGGCCGAGCAGAGCGCCGGGGTGCTGCAGCTGCGCCAGCAGGCGCGCGA
GGCGGCCGTGCTGCTGCAGGCGGAGGACCGGTTGCGCTACGCGCTCGTGCCGCGGTATCGCGGCCTCTTC
CATCACATCAGCAAGCTGGACGGCGGCGTGCGCTTCTTGGTGCAGCTGCGGGCCGATCTGCTGGAGGCGC
AGGCCCTCAAGCTGGTGGAGGGGCCGCACGTCCGGGAAATGAACGGAGTGCTCAAAAGCATGCTGTCTGA
GTGGTTCTCCTCCGGCTTCCTGAACCTGGAGCGGGTCACCTGGCACTCACCCTGTGAGGTACTTCAGAAG
ATCAGCGAGTGTGAGGCTGTGCACCCTGTGAAAAACTGGATGGACATGAAGCGGCGTGTGGGGCCCTACC
GGAGATGTTACTTCTTCTCCCACTGCTCCACCCCCGGGGAACCCCTGGTGGTTCTGCATGTGGCTCTGAC
TGGTGACATTTCCAACAACATCCAGGGCATTGTGAAGGAGTGCCCTCCGACTGAAACCGAGGAGAGGAAC
AGGATCGCCGCTGCCATCTTCTACTCCATCAGCCTGACCCAGCAGGGCCTGCAGGGGGTGGAGCTCGGGA
CCTTCCTCATAAAGAGAGTGGTCAAGGAGCTGCAGAAGGAATTTCCTCAGCTGGGGGCCTTTTCAAGCCT
GTCGCCTATCCCTGGATTCACCAAGTGGCTGCTGGGCCTCCTGAATGTGCAGGGGAAGGAGCATGGGAGG
AACGAACTATTCACAGACTCAGAGTGCCAAGAAATCTCAGCGGTTACCGGCAACCCTGTTCACGAGAGCC
TCAAGGGGTTCCTGAGCAGTGGTGAGTGGGTGAAGTCAGAGAAGCTGACGCAGGCGCTGCAGGGGCCACT
AATGAGGCTGTGTGCCTGGTACCTGTACGGTGAGAAGCACCGAGGCTACGCCCTCAACCCAGTGGCCAAC
TTCCATCTGCAGAATGGGGCTGTGATGTGGCGTATCAACTGGATGGCTGACAGCAGCCTCAAAGGCCTCA
CCAGCTCATGCGGCCTCATGGTCAACTACCGCTACTACCTGGAGGAGACAGGCCCCAACAGTATCTCCTA
CCTGGGCTCCAAGAACATCAAAGCTTCCGAGCAGATCCTCAGCCTGGTAGCCCAGTTCCAGAACAACAGC
AAACTCTAG

Translation (492 aa):
MRGLGPGLRARRLLPLRSPPRPPGPRGRRLCGGLAASAMDELLRRAVPPTPAYELREKTPAPAEGQCADF
VSFYGGLAEASQRAELLGRLAQGFGVDHGQVAEQSAGVLQLRQQAREAAVLLQAEDRLRYALVPRYRGLF
HHISKLDGGVRFLVQLRADLLEAQALKLVEGPHVREMNGVLKSMLSEWFSSGFLNLERVTWHSPCEVLQK
ISECEAVHPVKNWMDMKRRVGPYRRCYFFSHCSTPGEPLVVLHVALTGDISNNIQGIVKECPPTETEERN
RIAAAIFYSISLTQQGLQGVELGTFLIKRVVKELQKEFPQLGAFSSLSPIPGFTKWLLGLLNVQGKEHGR
NELFTDSECQEISAVTGNPVHESLKGFLSSGEWVKSEKLTQALQGPLMRLCAWYLYGEKHRGYALNPVAN
FHLQNGAVMWRINWMADSSLKGLTSSCGLMVNYRYYLEETGPNSISYLGSKNIKASEQILSLVAQFQNNS
KL


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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