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Report for CCDS10851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10851.1 Public Homo sapiens 16 PSKH1 24 110 108 CCDS HistoryNCBI Gene:5681Re-query CCDS DB by CCDS ID:10851.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10851.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291041.6 ENSP00000291041.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291041.6Link to Ensembl Protein Viewer:ENSP00000291041.4Re-query CCDS DB by Nucleotide ID:ENST00000291041Re-query CCDS DB by Protein ID:ENSP00000291041
Original member Current member NCBI NM_006742.3 NP_006733.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006742.3Link to Protein Sequence:NP_006733.1Re-query CCDS DB by Nucleotide ID:NM_006742Re-query CCDS DB by Protein ID:NP_006733Link to BLAST:NP_006733.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006733.1 424 P11801 424 100% 0 0

Chromosomal Locations for CCDS 10851.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67908750 67909706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67927325 67927642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1275 nt):
ATGGGCTGTGGGACAAGCAAGGTCCTTCCCGAGCCACCCAAGGATGTCCAGCTGGATCTGGTCAAGAAGG
TGGAGCCCTTCAGTGGCACTAAGAGTGACGTGTACAAGCACTTCATCACAGAGGTGGACAGTGTTGGCCC
TGTCAAAGCCGGGTTCCCAGCAGCAAGTCAGTATGCACACCCCTGCCCCGGTCCCCCGACTGCTGGCCAC
ACGGAGCCTCCCTCAGAACCACCACGCAGGGCCAGGGTAGCTAAGTACAGGGCCAAGTTTGACCCACGTG
TTACAGCTAAGTATGACATCAAGGCCCTAATTGGCCGAGGCAGCTTCAGCCGAGTGGTACGTGTAGAGCA
CCGGGCAACCCGGCAGCCGTATGCCATCAAGATGATTGAGACCAAGTACCGGGAGGGGCGGGAGGTGTGT
GAGTCGGAGCTGCGTGTGCTGCGTCGGGTGCGTCATGCCAACATCATCCAGCTGGTGGAGGTGTTCGAGA
CACAGGAGCGGGTGTACATGGTGATGGAGCTGGCCACTGGTGGAGAGCTCTTTGACCGCATCATTGCCAA
GGGCTCCTTCACCGAGCGTGACGCCACGCGGGTGCTGCAGATGGTGCTGGATGGCGTCCGGTATCTGCAT
GCACTGGGCATCACACACCGAGACCTCAAACCTGAGAATCTGCTCTACTACCATCCGGGCACTGACTCCA
AGATCATCATCACCGACTTCGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACTGCTTGATGAAGACCAC
CTGTGGCACGCCTGAGTACATTGCCCCAGAAGTCCTGGTCCGCAAGCCATACACCAACTCAGTGGACATG
TGGGCGCTGGGCGTCATTGCCTACATCCTACTCAGTGGCACCATGCCGTTTGAGGATGACAACCGTACCC
GGCTGTACCGGCAGATCCTCAGGGGCAAGTACAGTTACTCTGGGGAGCCCTGGCCTAGTGTGTCCAACCT
GGCCAAGGACTTCATTGACCGCCTGCTGACAGTGGACCCTGGAGCCCGTATGACTGCACTGCAGGCCCTG
AGGCACCCGTGGGTGGTGAGCATGGCTGCCTCTTCATCCATGAAGAACCTGCACCGCTCCATATCCCAGA
ACCTCCTTAAACGTGCCTCCTCGCGCTGCCAGAGCACCAAATCTGCCCAGTCCACGCGTTCCAGCCGCTC
CACACGCTCCAATAAGTCACGCCGTGTGCGGGAACGGGAGCTGCGGGAGCTCAACCTGCGCTACCAGCAG
CAATACAATGGCTGA

Translation (424 aa):
MGCGTSKVLPEPPKDVQLDLVKKVEPFSGTKSDVYKHFITEVDSVGPVKAGFPAASQYAHPCPGPPTAGH
TEPPSEPPRRARVAKYRAKFDPRVTAKYDIKALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREVC
ESELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLH
ALGITHRDLKPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDM
WALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDPGARMTALQAL
RHPWVVSMAASSSMKNLHRSISQNLLKRASSRCQSTKSAQSTRSSRSTRSNKSRRVRERELRELNLRYQQ
QYNG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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