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Report for CCDS9927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9927.1 Public Homo sapiens 14 SERPINA4 24 110 108 CCDS HistoryNCBI Gene:5267Re-query CCDS DB by CCDS ID:9927.1Re-query CCDS DB by GeneID:5267See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298841.5 ENSP00000298841.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000298841.5Link to Ensembl Protein Viewer:ENSP00000298841.5Re-query CCDS DB by Nucleotide ID:ENST00000298841Re-query CCDS DB by Protein ID:ENSP00000298841
Original member Current member EBI ENST00000557004.6 ENSP00000450838.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000557004.6Link to Ensembl Protein Viewer:ENSP00000450838.1Re-query CCDS DB by Nucleotide ID:ENST00000557004Re-query CCDS DB by Protein ID:ENSP00000450838
Original member Current member EBI ENST00000555095.5 ENSP00000451172.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555095.5Link to Ensembl Protein Viewer:ENSP00000451172.1Re-query CCDS DB by Nucleotide ID:ENST00000555095Re-query CCDS DB by Protein ID:ENSP00000451172
Original member Current member NCBI NM_001289033.2 NP_001275962.1 Accepted alive Link to Nucleotide Sequence:NM_001289033.2Link to Protein Sequence:NP_001275962.1Re-query CCDS DB by Nucleotide ID:NM_001289033Re-query CCDS DB by Protein ID:NP_001275962Link to BLAST:NP_001275962.1
Original member Current member NCBI NM_006215.4 NP_006206.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006215.4Link to Protein Sequence:NP_006206.2Re-query CCDS DB by Nucleotide ID:NM_006215Re-query CCDS DB by Protein ID:NP_006206Link to BLAST:NP_006206.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275962.1 427 P29622 427 100% 0 0
NP_006206.2 427 P29622 427 100% 0 0

Chromosomal Locations for CCDS 9927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94563483 94564131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94566970 94567243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94568129 94568288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94569395 94569595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGCATCTTATCGACTACCTGCTCCTCCTGCTGGTTGGACTACTGGCCCTTTCTCATGGCCAGCTGCACG
TTGAGCATGATGGTGAGAGTTGCAGTAACAGCTCCCACCAGCAGATTCTGGAGACAGGTGAGGGCTCCCC
CAGCCTCAAGATAGCCCCTGCCAATGCTGACTTTGCCTTCCGCTTCTACTACCTGATCGCTTCGGAGACC
CCGGGGAAGAACATCTTTTTCTCCCCGCTGAGCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGGCCT
GCTCACACAGCCGCAGCCAGATCCTTGAGGGCCTGGGCTTCAACCTCACCGAGCTGTCTGAGTCCGATGT
CCATAGGGGCTTCCAGCACCTCCTGCACACTCTCAACCTCCCCGGCCATGGGCTGGAAACACGCGTGGGC
AGTGCTCTGTTCCTGAGCCACAACCTGAAGTTCCTTGCAAAATTCCTGAATGACACCATGGCCGTCTATG
AGGCTAAACTCTTCCACACCAACTTCTACGACACTGTGGGCACAATCCAGCTTATCAACGACCACGTCAA
GAAGGAAACTCGAGGGAAGATTGTGGATTTGGTCAGTGAGCTCAAGAAGGACGTCTTGATGGTGCTGGTG
AATTACATTTACTTCAAAGCCCTGTGGGAGAAACCATTCATTTCCTCAAGGACCACTCCCAAAGACTTCT
ATGTTGATGAGAACACAACAGTCCGGGTGCCCATGATGCTGCAGGACCAGGAGCATCACTGGTATCTTCA
TGACAGATACTTGCCCTGCTCGGTGCTACGGATGGATTACAAAGGAGACGCAACCGTGTTTTTCATTCTC
CCTAACCAAGGCAAAATGAGGGAGATTGAAGAGGTTCTGACTCCAGAGATGCTAATGAGGTGGAACAACT
TGTTGCGGAAGAGGAATTTTTACAAGAAGCTAGAGTTGCATCTTCCCAAGTTCTCCATTTCTGGCTCCTA
TGTATTAGATCAGATTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCAAGTGGGCTGACTTATCCGGC
ATCACCAAACAGCAAAAACTGGAGGCATCCAAAAGTTTCCACAAGGCCACCTTGGACGTGGATGAGGCTG
GCACCGAGGCTGCAGCAGCCACCAGCTTCGCGATCAAATTCTTCTCTGCCCAGACCAATCGCCACATCCT
GCGATTCAACCGGCCCTTCCTTGTGGTGATCTTTTCCACCAGCACCCAGAGTGTCCTCTTTCTGGGCAAG
GTCGTCGACCCCACGAAACCATAG

Translation (427 aa):
MHLIDYLLLLLVGLLALSHGQLHVEHDGESCSNSSHQQILETGEGSPSLKIAPANADFAFRFYYLIASET
PGKNIFFSPLSISAAYAMLSLGACSHSRSQILEGLGFNLTELSESDVHRGFQHLLHTLNLPGHGLETRVG
SALFLSHNLKFLAKFLNDTMAVYEAKLFHTNFYDTVGTIQLINDHVKKETRGKIVDLVSELKKDVLMVLV
NYIYFKALWEKPFISSRTTPKDFYVDENTTVRVPMMLQDQEHHWYLHDRYLPCSVLRMDYKGDATVFFIL
PNQGKMREIEEVLTPEMLMRWNNLLRKRNFYKKLELHLPKFSISGSYVLDQILPRLGFTDLFSKWADLSG
ITKQQKLEASKSFHKATLDVDEAGTEAAAATSFAIKFFSAQTNRHILRFNRPFLVVIFSTSTQSVLFLGK
VVDPTKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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