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Report for CCDS10607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10607.1 Public Homo sapiens 16 USP31 24 110 108 CCDS HistoryNCBI Gene:57478Re-query CCDS DB by CCDS ID:10607.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219689.12 ENSP00000219689.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219689.12Link to Ensembl Protein Viewer:ENSP00000219689.7Re-query CCDS DB by Nucleotide ID:ENST00000219689Re-query CCDS DB by Protein ID:ENSP00000219689
Original member Current member NCBI NM_020718.4 NP_065769.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020718.4Link to Protein Sequence:NP_065769.3Re-query CCDS DB by Nucleotide ID:NM_020718Re-query CCDS DB by Protein ID:NP_065769Link to BLAST:NP_065769.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065769.3 1352 Q70CQ4-1 1352 100% 0 0

Chromosomal Locations for CCDS 10607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 23068046 23069616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23072045 23072197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23073722 23073880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23079946 23080171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23082438 23082557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23084860 23084989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23085585 23085662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23087092 23087186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23087724 23087835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23090624 23090804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23102319 23102463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23105441 23105576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23106213 23106305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23106399 23106487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23108046 23108183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23148638 23149270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4059 nt):
ATGTCCAAGGTAACGGCGCCTGGGTCCGGGCCGCCGGCGGCGGCGAGCGGGAAGGAGAAGCGCTCCTTCA
GCAAGCGGCTGTTTCGGAGCGGCCGCGCTGGCGGCGGCGGCGCGGGGGGCCCCGGGGCGTCCGGGCCGGC
CGCGCCTTCCTCGCCCTCCTCGCCCTCCTCTGCACGCTCGGTGGGCAGCTTCATGAGCCGCGTTCTCAAG
ACGCTGTCCACGCTCTCGCACCTTAGCTCTGAGGGCGCCGCCCCAGACCGCGGCGGCCTCCGCAGCTGCT
TCCCGCCCGGGCCGGCCGCCGCGCCCACGCCGCCGCCGTGCCCGCCGCCGCCCGCCTCTCCCGCGCCGCC
CGCTTGCGCCGCCGAGCCGGTGCCCGGCGTGGCGGGGCTCCGCAACCACGGCAACACGTGCTTCATGAAC
GCCACGCTGCAGTGCCTCAGCAACACCGAGCTCTTCGCCGAGTACCTGGCGCTGGGCCAGTACCGGGCGG
GGCGGCCCGAGCCCTCGCCTGACCCGGAGCAGCCTGCGGGCCGCGGCGCGCAGGGCCAGGGCGAGGTCAC
TGAGCAGCTGGCGCACCTGGTGCGGGCCCTCTGGACCCTGGAGTACACCCCGCAGCACAGCCGCGACTTC
AAGACTATTGTGTCAAAGAATGCACTGCAGTACCGGGGAAATTCCCAACATGATGCCCAGGAGTTTCTGC
TGTGGCTTTTGGACCGAGTTCATGAAGACCTCAACCATTCAGTGAAGCAGAGTGGCCAGCCTCCTCTGAA
GCCACCATCAGAGACTGATATGATGCCTGAGGGACCATCTTTCCCTGTCTGTAGCACTTTTGTACAAGAA
CTCTTTCAAGCGCAATACAGATCTTCTTTGACGTGTCCTCATTGTCAGAAACAGAGCAACACTTTTGATC
CTTTCCTTTGCATTTCTTTGCCAATTCCTCTGCCCCACACAAGGCCTCTCTATGTCACTGTAGTGTATCA
AGGCAAATGTTCTCACTGCATGAGGATTGGTGTGGCCGTACCTCTGTCTGGGACTGTCGCCAGACTTCGG
GAAGCAGTGTCTATGGAAACAAAGATCCCCACTGATCAGATTGTGTTAACAGAAATGTACTATGATGGGT
TCCATCGTTCCTTTTGTGATACAGACGACCTGGAAACAGTCCATGAAAGCGACTGCATTTTTGCCTTTGA
GACTCCCGAAATATTTAGGCCTGAAGGAATTCTCAGTCAAAGAGGAATTCATTTAAACAACAACCTAAAC
CACTTGAAATTTGGCTTGGATTATCATAGACTGTCTTCTCCTACACAAACAGCAGCAAAGCAGGGGAAAA
TGGATTCTCCCACATCAAGAGCAGGCAGCGACAAGATTGTCCTGTTGGTGTGTAACCGAGCCTGCACTGG
GCAACAAGGGAAAAGATTTGGACTGCCTTTTGTGCTGCACTTAGAGAAGACAATAGCTTGGGACCTTCTG
CAGAAGGAAATCTTGGAGAAGATGAAGTATTTCTTGAGGCCCACGGTTTGCATTCAGGTGTGTCCATTCA
GCTTGCGTGTGGTCAGTGTTGTTGGAATAACATATTTGCTGCCCCAGGAGGAGCAGCCCTTGTGCCACCC
AATAGTAGAAAGGGCATTAAAATCTTGTGGACCAGGTGGCACTGCTCATGTGAAATTAGTAGTCGAGTGG
GACAAGGAGACAAGAGATTTCTTATTTGTAAATACTGAGGATGAGTATATTCCTGATGCAGAAAGTGTTC
GTCTGCAAAGGGAGCGTCATCATCAGCCTCAAACCTGCACTTTATCCCAGTGTTTCCAACTGTACACCAA
AGAGGAGCGGCTTGCCCCCGATGATGCCTGGCGTTGCCCACACTGTAAGCAGCTGCAGCAGGGAAGCATT
ACGTTAAGCCTCTGGACTCTGCCTGATGTGCTTATTATACATCTAAAGAGATTTCGGCAGGAAGGAGACA
GGCGCATGAAACTTCAGAACATGGTCAAATTCCCCTTGACTGGCCTGGACATGACACCTCACGTGGTTAA
GAGGAGCCAGAGCAGCTGGAGTTTGCCATCGCATTGGTCCCCGTGGAGACGGCCCTATGGACTCGGGAGG
GACCCTGAGGACTACATCTATGACCTGTATGCTGTGTGCAATCACCATGGCACCATGCAAGGGGGGCACT
ACACAGCGTACTGTAAGAACTCTGTGGACGGCCTCTGGTACTGCTTCGATGACAGCGATGTGCAGCAGCT
GTCAGAAGATGAGGTCTGCACGCAGACAGCATACATCCTCTTCTACCAGAGGCGGACAGCCATCCCGTCA
TGGTCAGCCAACAGCTCGGTGGCAGGCTCCACAAGTTCTTCCCTGTGTGAACACTGGGTGAGCCGGCTCC
CGGGCAGCAAGCCAGCCAGCGTGACCTCTGCAGCTTCCTCCAGACGCACCTCCCTGGCGTCGCTCTCTGA
GTCCGTGGAGATGACTGGAGAAAGGAGTGAAGATGATGGAGGCTTTTCAACTCGACCATTTGTGAGAAGT
GTCCAGCGTCAGAGTTTGTCATCCAGATCTTCTGTCACCAGCCCCTTGGCCGTCAATGAAAATTGCATGA
GACCTTCATGGTCCCTGTCTGCTAAGCTGCAGATGCGCTCCAATTCTCCATCCCGATTTTCAGGGGATTC
GCCAATTCACAGCTCTGCTTCCACCTTGGAGAAGATTGGGGAGGCAGCAGATGACAAGGTCTCCATCTCT
TGCTTTGGTAGCTTGCGGAACCTTTCTAGCAGTTACCAGGAACCAAGCGACAGTCATAGTCGCCGTGAGC
ACAAGGCTGTGGGCCGGGCCCCTCTGGCTGTCATGGAAGGCGTGTTCAAAGACGAATCGGACACCCGCAG
ATTGAACTCCAGTGTCGTAGATACACAGAGCAAACATTCAGCACAAGGGGACCGCCTGCCCCCGCTCTCT
GGTCCATTTGATAACAATAATCAGATCGCTTATGTGGATCAGAGCGACTCCGTAGACAGCTCTCCAGTCA
AAGAGGTGAAAGCCCCCAGCCACCCAGGCTCACTCGCAAAGAAACCAGAGAGCACAACTAAGAGATCCCC
CAGTTCCAAAGGCACTTCTGAGCCAGAGAAAAGCTTGCGGAAGGGGAGACCAGCCTTGGCAAGCCAGGAG
TCATCCCTTTCAAGTACATCCCCTTCTTCTCCTCTTCCTGTAAAAGTCTCTCTAAAGCCCTCCCGCTCCC
GCAGCAAAGCAGATTCTTCTTCCAGGGGCAGTGGACGGCATTCATCCCCTGCCCCTGCCCAACCCAAAAA
GGAGTCATCCCCGAAATCTCAGGACTCCGTGTCATCTCCTTCGCCACAGAAGCAGAAGTCAGCCTCGGCC
CTCACCTACACTGCTTCCTCCACATCTGCCAAAAAGGCCTCGGGCCCTGCCACAAGGAGCCCTTTCCCAC
CTGGGAAGAGCAGGACTTCAGACCACAGCTTGAGTAGAGAGGGCTCCAGACAAAGCTTGGGTTCTGACAG
AGCCAGCGCCACCTCCACCTCCAAACCCAATTCCCCTCGGGTGAGCCAGGCCCGAGCAGGGGAGGGCAGG
GGGGCCGGGAAGCACGTGCGGAGCTCCTCCATGGCCAGCCTGCGCTCCCCCAGCACAAGCATCAAGTCTG
GTTTGAAGAGGGACAGCAAGTCTGAGGACAAGGGGCTGTCCTTCTTCAAATCAGCCTTGAGACAGAAGGA
AACCCGGCGCTCGACGGATCTTGGCAAGACAGCCTTGCTCTCTAAAAAGGCTGGTGGGAGCTCTGTTAAG
TCTGTCTGTAAGAACACCGGGGACGACGAGGCAGAGAGAGGCCACCAGCCTCCAGCTTCCCAGCAGCCAA
ATGCAAATACAACGGGAAAAGAGCAGCTTGTCACCAAGGACCCTGCTTCTGCCAAACATTCCCTGCTGTC
CGCTCGCAAATCCAAGTCTTCCCAACTAGACTCTGGAGTTCCCTCGTCTCCGGGTGGCAGGCAGTCTGCA
GAGAAATCCTCAAAAAAGTTATCTTCTAGCATGCAAACCTCTGCACGGCCTTCTCAAAAACCTCAGTGA

Translation (1352 aa):
MSKVTAPGSGPPAAASGKEKRSFSKRLFRSGRAGGGGAGGPGASGPAAPSSPSSPSSARSVGSFMSRVLK
TLSTLSHLSSEGAAPDRGGLRSCFPPGPAAAPTPPPCPPPPASPAPPACAAEPVPGVAGLRNHGNTCFMN
ATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGEVTEQLAHLVRALWTLEYTPQHSRDF
KTIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLNHSVKQSGQPPLKPPSETDMMPEGPSFPVCSTFVQE
LFQAQYRSSLTCPHCQKQSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLR
EAVSMETKIPTDQIVLTEMYYDGFHRSFCDTDDLETVHESDCIFAFETPEIFRPEGILSQRGIHLNNNLN
HLKFGLDYHRLSSPTQTAAKQGKMDSPTSRAGSDKIVLLVCNRACTGQQGKRFGLPFVLHLEKTIAWDLL
QKEILEKMKYFLRPTVCIQVCPFSLRVVSVVGITYLLPQEEQPLCHPIVERALKSCGPGGTAHVKLVVEW
DKETRDFLFVNTEDEYIPDAESVRLQRERHHQPQTCTLSQCFQLYTKEERLAPDDAWRCPHCKQLQQGSI
TLSLWTLPDVLIIHLKRFRQEGDRRMKLQNMVKFPLTGLDMTPHVVKRSQSSWSLPSHWSPWRRPYGLGR
DPEDYIYDLYAVCNHHGTMQGGHYTAYCKNSVDGLWYCFDDSDVQQLSEDEVCTQTAYILFYQRRTAIPS
WSANSSVAGSTSSSLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEMTGERSEDDGGFSTRPFVRS
VQRQSLSSRSSVTSPLAVNENCMRPSWSLSAKLQMRSNSPSRFSGDSPIHSSASTLEKIGEAADDKVSIS
CFGSLRNLSSSYQEPSDSHSRREHKAVGRAPLAVMEGVFKDESDTRRLNSSVVDTQSKHSAQGDRLPPLS
GPFDNNNQIAYVDQSDSVDSSPVKEVKAPSHPGSLAKKPESTTKRSPSSKGTSEPEKSLRKGRPALASQE
SSLSSTSPSSPLPVKVSLKPSRSRSKADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASA
LTYTASSTSAKKASGPATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRVSQARAGEGR
GAGKHVRSSSMASLRSPSTSIKSGLKRDSKSEDKGLSFFKSALRQKETRRSTDLGKTALLSKKAGGSSVK
SVCKNTGDDEAERGHQPPASQQPNANTTGKEQLVTKDPASAKHSLLSARKSKSSQLDSGVPSSPGGRQSA
EKSSKKLSSSMQTSARPSQKPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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