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Report for CCDS71952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71952.1 Public Mus musculus 7 Zfp473 23 108 98 CCDS HistoryNCBI Gene:243963Re-query CCDS DB by CCDS ID:71952.1Re-query CCDS DB by GeneID:243963See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71952.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118162.7 ENSMUSP00000113316.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118162.7Link to Ensembl Protein Viewer:ENSMUSP00000113316.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118162Re-query CCDS DB by Protein ID:ENSMUSP00000113316
Original member Current member EBI ENSMUST00000120798.7 ENSMUSP00000113789.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120798.7Link to Ensembl Protein Viewer:ENSMUSP00000113789.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120798Re-query CCDS DB by Protein ID:ENSMUSP00000113789
Original member Current member NCBI NM_001289838.1 NP_001276767.1 Accepted alive Link to Nucleotide Sequence:NM_001289838.1Link to Protein Sequence:NP_001276767.1Re-query CCDS DB by Nucleotide ID:NM_001289838Re-query CCDS DB by Protein ID:NP_001276767Link to BLAST:NP_001276767.1
Original member Current member NCBI NM_001289839.1 NP_001276768.1 Accepted alive Link to Nucleotide Sequence:NM_001289839.1Link to Protein Sequence:NP_001276768.1Re-query CCDS DB by Nucleotide ID:NM_001289839Re-query CCDS DB by Protein ID:NP_001276768Link to BLAST:NP_001276768.1

Chromosomal Locations for CCDS 71952.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44732229 44734645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44737966 44738031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44739503 44739635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44741689 44741748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGGAGAGGAAGGAGGACGACCTTAAAGGAGGTTGCTGGAATCAGCCAGCTGTGGCTGAGGAGTTTGAGA
CCCTCAAGGATTTAGCCATGGATTTCACCGTGGAAGACTGGAAAGACCTGGAGTCAGAGTGGGACCAGAG
AGACCTGTTCTGGGATGTGACGCTGAACCACTACCAGGACATGTTCTCATTTAATACTTCGCAACCCAGC
CTGACTTCCCAGCCAGATGTCAGGGAAGAGCTGGAAGCCACCAGTACTGAAGTGCCTGAGACCAAGAGCT
CTCCTTTGCAGAGTGGTTTCGTAGAAGAAGACTTCTCCCAGATTATGGAGATATTTTCCAACGGGCAACT
CAACTTTGAAGCCTGTATAGGTGAGGATTGGCTAAATAGTTTTCTCGGAGATCCAGAAAGTCTTCCAAGA
CCTGACATCAGCGACAAGGAAAGCCCCGCGGATCATCAGAGTCCTGAGTCCAAGAGCGGCCTCAGTCCTG
GGCCTCCCCTTTGCACAAGAGAGGATGCTGTGATGTCTGCTAGTCCTGAAAAGACCCTCACTCCAGTGAT
ACTGAAGGAATCCAGGAGTGACCTGAGCCAGGAGGACTCTGTCCAGGGACACGAGAAGCCATATAAGTGT
AGTGAGTGTGGGGAAAGCTTCAGCCAGAGTCACCACCTCATCCAGCACTGGGTTCTCCACACCTCAGGGG
AGCCTCCTATATGGCGAGAGCAGCAGCGAGGTCTCAGCCAGGGTGCTCACTTTCCCATGTGTCCAGGGAC
TCCAGCAAGCTATGAATCCTACACGTGTCAGGAGTGTGGGAAAAGGTTTAGTCAGAATGTGTACCTCCAG
TGGCATCAGAAAATCCACACTGGAGAAAAACTTTGTAAAACTCAAAGTGACAGCAACCTAGAAGGGCTCT
CTAGGAGTCCGAGTGTCGAGCCAGGAAAGCAGCGGCTGAGTAAAGACACTGACTCAGCAAAACCGAGTAC
CATTCACGGTCAGGACCAGGAAAAACCACCTACTGGTGAAAGTCGTGACCAAGAAAACCTGCATGAGAGC
CAGCCTGGTGACAGGCCATCCGTTCTTCATCCAAAGCCTCTTAGGCATCAGAAGACTCCTACAAACGCTA
AGTGCTTCAGATGTAAGAAGTGTGGGGAGACATTCAGTGGGGCCTTTCATCTAGCTAAACACCAGAGAGC
CCATGCTCAGAGACTCTACAAGTGCGCTTCGTGCCCTGCCGTCTTCAACCTAAGCAAGCATTGCTTCCAG
CATCGCAAGTCACATTTCCCCAGCGCGGCCTGCGAGTGTCAGGGATGCAGAAAGAGCTTTAATTGGCGGT
CATCACTCATTAAGCACCAGGCTATTCACAAAGGAGAGAAGCCGTACAAGTGTGATGAATGTGGTAAAGC
TTTCAACCACTCCTCCACCCTGAAGATCCACCAGAGGATCCACAGTGGACAGAAGCCTCACAAATGCAGT
GAGTGCGGGAAAGCCTTCTGTCGGAGAACAGATCTTACTGAGCATCAGCGAGTCCACTCGGGCTTCAGAC
CCCATCAGTGTCCCGTGTGTGCCAGGACTTTTAACCGACCTTCACACTTAGTTCGACACCGGCTGAGACA
TGCTGAAGAAAGGCACTTTGGCTGTGCTAAATGCAAGGAGACCTTCATCTATAAAGAACAGCTAGAGCGG
CACAATAAAATCCACACCATCGAGGGCTTGTATGAGTGTAAGCAGTGTGGAGAACACTTCATTTGCAGGT
CAACTCTGAATTGCCACCTGAGCATACACATTAGAGAAAATACAAGTGAGAAAGTTGTGGGTCAGAACTC
ACAGCACACTGAAAAATGCTTTAAGAATACCAAGTGTAGAAAAGCCCCTAACCACAGCAGATACCTAGGG
CAGCATGAGAAGATTCATGCCCAGGTGACATCCGGTGAGTGTGACCCATGTGGGGAAACCTATGACCAGA
GTGTGCAGCCCATTTGCCATCAGAGCATCTGTGCTGGTGTGAAACCAAGTGAATGCGCTGAGCCTGAGAA
ATGCACGCGAAACACCTCTGCCAGTGAGCACCATCCTTCCCAAAGGGAACCATCCTTCAAGTGTGACATA
TACAACAGGGCCTTCAAACAGCGTGCCCACCTTTCAAAACATCAGTTGATTCACATCACTGAGAAGCCCT
TTAAATGCAACGAATGTGACAGAGCCTTCAAGCAGAGTAACTACCTCATTCAGCATCAGAAGACTCACAC
TGCAGAGAAGCACTTTGAATGTAGCGAGTGTGGGAAAACATTTCATCAGCGATCATGCCTTTCTAAGCAC
CAGAAAATCCACTCAGGGGAGAAGCCCTTTAAGTGTGGTGACTGTGGGAAAGCCTTCATCTCTGGTGCCC
AGCTCATCCGACACCAGAGAATTCACACTGGGGAGAAGCCGTACGTCTGCCAGGAATGTGGGAAAACCTT
CAGCCAGAGCTCGTGCCTTACCCTTCACCTTAGAATTCACACTGGGGAGAAGCCGTACACATGCGGCACG
TGCGGGAAAGCCTTTGCTCAGAGAGCAAACCAGAGGAAGCACGAGAGAATTCACACTGGGGAGAAGCCCT
ATGCCTGCGGGCTGTGTGGGAAGGCCTTCGGCCTCCGCACCCATCTCCAGCAACACCAGAGAATTCACAC
CAAGGCCAAACCATAG

Translation (891 aa):
MERKEDDLKGGCWNQPAVAEEFETLKDLAMDFTVEDWKDLESEWDQRDLFWDVTLNHYQDMFSFNTSQPS
LTSQPDVREELEATSTEVPETKSSPLQSGFVEEDFSQIMEIFSNGQLNFEACIGEDWLNSFLGDPESLPR
PDISDKESPADHQSPESKSGLSPGPPLCTREDAVMSASPEKTLTPVILKESRSDLSQEDSVQGHEKPYKC
SECGESFSQSHHLIQHWVLHTSGEPPIWREQQRGLSQGAHFPMCPGTPASYESYTCQECGKRFSQNVYLQ
WHQKIHTGEKLCKTQSDSNLEGLSRSPSVEPGKQRLSKDTDSAKPSTIHGQDQEKPPTGESRDQENLHES
QPGDRPSVLHPKPLRHQKTPTNAKCFRCKKCGETFSGAFHLAKHQRAHAQRLYKCASCPAVFNLSKHCFQ
HRKSHFPSAACECQGCRKSFNWRSSLIKHQAIHKGEKPYKCDECGKAFNHSSTLKIHQRIHSGQKPHKCS
ECGKAFCRRTDLTEHQRVHSGFRPHQCPVCARTFNRPSHLVRHRLRHAEERHFGCAKCKETFIYKEQLER
HNKIHTIEGLYECKQCGEHFICRSTLNCHLSIHIRENTSEKVVGQNSQHTEKCFKNTKCRKAPNHSRYLG
QHEKIHAQVTSGECDPCGETYDQSVQPICHQSICAGVKPSECAEPEKCTRNTSASEHHPSQREPSFKCDI
YNRAFKQRAHLSKHQLIHITEKPFKCNECDRAFKQSNYLIQHQKTHTAEKHFECSECGKTFHQRSCLSKH
QKIHSGEKPFKCGDCGKAFISGAQLIRHQRIHTGEKPYVCQECGKTFSQSSCLTLHLRIHTGEKPYTCGT
CGKAFAQRANQRKHERIHTGEKPYACGLCGKAFGLRTHLQQHQRIHTKAKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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