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Report for CCDS33579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33579.1 Public Homo sapiens 21 PWP2 24 110 108 CCDS HistoryNCBI Gene:5822Re-query CCDS DB by CCDS ID:33579.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33579.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000291576.12 ENSP00000291576.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000291576.12Link to Ensembl Protein Viewer:ENSP00000291576.6Re-query CCDS DB by Nucleotide ID:ENST00000291576Re-query CCDS DB by Protein ID:ENSP00000291576
Original member Current member NCBI NM_005049.3 NP_005040.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005049.3Link to Protein Sequence:NP_005040.2Re-query CCDS DB by Nucleotide ID:NM_005049Re-query CCDS DB by Protein ID:NP_005040Link to BLAST:NP_005040.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005040.2 919 Q15269 919 100% 0 0

Chromosomal Locations for CCDS 33579.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44107417 44107434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44108984 44109096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44113753 44113847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44114179 44114278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44114625 44114768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44115264 44115399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44115691 44115920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44117820 44117963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44118763 44118833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44119387 44119523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120348 44120496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120631 44120778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44120952 44121102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44122177 44122357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44124580 44124727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44126011 44126119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44126900 44126965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44127932 44128150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44128247 44128397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44128552 44128626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 44130597 44130771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2760 nt):
ATGAAGTTCGCTTACCGGTTTTCAAATTTGCTGGGTACGGTGTACCGGCGTGGGAACCTAAATTTTACCT
GCGATGGAAATTCAGTTATCAGTCCCGTGGGCAATAGAGTCACTGTATTTGACCTTAAAAACAACAAATC
TGACACGCTGCCCCTGGCCACTCGGTACAACGTCAAGTGCGTGGGGCTGTCCCCGGATGGCCGCCTCGCT
ATCATCGTCGATGAAGGGGGCGATGCGCTGCTGGTCAGCCTGGTCTGCAGGTCTGTGCTGCACCACTTCC
ACTTCAAGGGCTCTGTGCACAGTGTGTCCTTCTCCCCTGATGGCAGGAAGTTTGTTGTCACAAAGGGTAA
CATTGCCCAGATGTATCATGCCCCTGGGAAGAAGCGGGAGTTCAACGCCTTCGTTCTGGACAAGACCTAT
TTTGGGCCCTACGATGAGACCACCTGCATCGACTGGACGGATGACTCCAGGTGCTTTGTGGTTGGGAGCA
AAGACATGTCCACCTGGGTGTTCGGAGCCGAGCGCTGGGACAACCTCATCTACTATGCACTGGGGGGACA
TAAGGATGCCATCGTGGCCTGCTTCTTTGAATCCAACAGCCTGGACCTGTACTCACTCAGCCAGGACGGA
GTGCTGTGCATGTGGCAGTGTGACACGCCCCCCGAGGGCTTGCGGCTGAAGCCCCCTGCGGGCTGGAAAG
CAGACCTGTTGCAGCGGGAGGAGGAAGAGGAGGAGGAGGAGGACCAGGAGGGCGACAGAGAGACCACCAT
CCGGGGAAAAGCCACTCCGGCCGAGGAGGAGAAGACAGGAAAAGTGAAGTACTCACGGCTGGCCAAGTAC
TTCTTCAATAAAGAAGGGGATTTTAACAACCTGACAGCTGCAGCATTTCATAAGAAGTCTCACCTCTTGG
TCACTGGCTTTGCTTCTGGAATCTTCCATCTTCATGAGCTGCCAGAGTTTAACCTCATCCACTCCCTGAG
CATTTCAGATCAGAGCATCGCCTCAGTGGCCATCAATAGCTCGGGGGACTGGATTGCTTTTGGCTGTTCA
GGCCTGGGCCAGCTGCTGGTGTGGGAGTGGCAGAGTGAGTCCTACGTGCTCAAGCAGCAGGGCCACTTCA
ACAGCATGGTGGCCCTGGCCTACTCGCCCGACGGACAGTACATCGTGACTGGCGGGGACGACGGCAAGGT
CAAGGTGTGGAACACCCTCAGCGGCTTCTGCTTCGTCACTTTTACGGAGCACTCCAGCGGGGTGACCGGT
GTGACCTTTACTGCCACCGGCTACGTTGTGGTGACCTCATCCATGGACGGGACCGTGCGAGCCTTTGACC
TTCACAGGTACCGAAACTTCCGCACCTTCACCTCTCCACGCCCCACCCAGTTCTCCTGTGTGGCGGTGGA
TGCGAGCGGTGAGATCGTCTCTGCAGGGGCGCAGGACTCCTTTGAGATTTTCGTGTGGTCCATGCAGACA
GGCAGGCTCCTTGATGTTTTGTCTGGACACGAAGGGCCCATCAGTGGTCTGTGTTTTAACCCAATGAAGT
CCGTCCTGGCCAGTGCCTCCTGGGACAAGACAGTGCGCCTATGGGACATGTTTGACAGCTGGAGGACCAA
GGAGACGCTGGCCCTGACCTCTGATGCTCTGGCTGTGACTTTTCGCCCTGATGGTGCGGAGCTGGCTGTG
GCCACACTGAACTCACAGATCACCTTCTGGGACCCTGAGAACGCGGTGCAGACGGGCTCCATTGAGGGCA
GGCATGACCTCAAGACTGGCAGGAAGGAGCTGGACAAGATTACAGCCAAGCACGCGGCCAAGGGGAAGGC
CTTCACCGCCCTGTGCTACTCTGCAGACGGCCACAGCATCCTGGCGGGAGGCATGTCCAAGTTCGTGTGC
ATCTACCACGTCCGTGAGCAGATTCTCATGAAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACGCCA
TGGAGGAATTTTTGAACCGAAGAAAAATGACAGAGTTTGGCAACCTGGCACTAATTGATCAGGATGCTGG
GCAGGAGGATGGAGTCGCGATACCACTGCCAGGCGTCAGGAAAGGTGACATGAGTTCTCGGCACTTCAAA
CCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCACTGGGCGCTGCTGGGCGGCCACCACCACGGAGG
GACTCCTCATCTACTCCCTGGACACCCGCGTGCTCTTTGACCCGTTTGAGCTGGACACCAGCGTCACCCC
CGGGAGGGTGCGCGAGGCACTGCGCCAGCAGGACTTCACCAGGGCCATCCTCATGGCCCTCCGGCTCAAC
GAGAGCAAACTGGTGCAGGAGGCCCTGGAGGCGGTGCCCAGGGGCGAGATTGAAGTGGTCACCTCCTCCC
TTCCTGAACTGTATGTGGAGAAAGTGCTGGAGTTTTTAGCTTCCTCCTTTGAAGTGTCTCGCCACCTGGA
ATTCTACCTCCTCTGGACTCACAAACTGCTCATGTTGCACGGACAGAAGCTGAAGTCCAGAGCCGGGACG
CTGCTGCCTGTCATTCAGTTCCTCCAGAAGAGCATCCAGCGGCACCTGGACGACCTGTCGAAACTCTGTA
GCTGGAACCACTATAACATGCAGTACGCACTAGCAGTTTCCAAGCAGCGGGGCACAAAACGCTCCCTAGA
CCCGCTGGGAAGTGAGGAGGAGGCAGAAGCATCTGAAGATGACAGCCTGCATCTGCTTGGAGGAGGAGGC
AGAGACTCAGAAGAAGAGATGCTGGCCTAG

Translation (919 aa):
MKFAYRFSNLLGTVYRRGNLNFTCDGNSVISPVGNRVTVFDLKNNKSDTLPLATRYNVKCVGLSPDGRLA
IIVDEGGDALLVSLVCRSVLHHFHFKGSVHSVSFSPDGRKFVVTKGNIAQMYHAPGKKREFNAFVLDKTY
FGPYDETTCIDWTDDSRCFVVGSKDMSTWVFGAERWDNLIYYALGGHKDAIVACFFESNSLDLYSLSQDG
VLCMWQCDTPPEGLRLKPPAGWKADLLQREEEEEEEEDQEGDRETTIRGKATPAEEEKTGKVKYSRLAKY
FFNKEGDFNNLTAAAFHKKSHLLVTGFASGIFHLHELPEFNLIHSLSISDQSIASVAINSSGDWIAFGCS
GLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTG
VTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQT
GRLLDVLSGHEGPISGLCFNPMKSVLASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFRPDGAELAV
ATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKGKAFTALCYSADGHSILAGGMSKFVC
IYHVREQILMKRFEISCNLSLDAMEEFLNRRKMTEFGNLALIDQDAGQEDGVAIPLPGVRKGDMSSRHFK
PEIRVTSLRFSPTGRCWAATTTEGLLIYSLDTRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLN
ESKLVQEALEAVPRGEIEVVTSSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQKLKSRAGT
LLPVIQFLQKSIQRHLDDLSKLCSWNHYNMQYALAVSKQRGTKRSLDPLGSEEEAEASEDDSLHLLGGGG
RDSEEEMLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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