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Report for CCDS9114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9114.1 Public Homo sapiens 12 PWP1 24 110 108 CCDS HistoryNCBI Gene:11137Re-query CCDS DB by CCDS ID:9114.1Re-query CCDS DB by GeneID:11137See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9114.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412830.8 ENSP00000387365.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000412830.8Link to Ensembl Protein Viewer:ENSP00000387365.3Re-query CCDS DB by Nucleotide ID:ENST00000412830Re-query CCDS DB by Protein ID:ENSP00000387365
Original member Current member NCBI NM_007062.3 NP_008993.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007062.3Link to Protein Sequence:NP_008993.1Re-query CCDS DB by Nucleotide ID:NM_007062Re-query CCDS DB by Protein ID:NP_008993Link to BLAST:NP_008993.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008993.1 501 Q13610-1 501 100% 0 0

Chromosomal Locations for CCDS 9114.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 107685900 107685971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107688448 107688506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107688615 107688802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107692814 107692899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107693000 107693096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107696474 107696584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107697467 107697597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107699373 107699434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107702935 107703031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107703685 107703746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107704636 107704747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107708926 107709016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107709111 107709232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107710405 107710510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 107712111 107712220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGAACCGCAGCCGCCAGGTGACGTGCGTGGCCTGGGTCCGCTGCGGCGTGGCCAAAGAGACACCAGACA
AGGTAGAGCTGAGTAAAGAAGAAGTAAAACGCCTCATTGCTGAGGCAAAGGAGAAATTGCAAGAAGAAGG
TGGTGGCAGTGATGAAGAGGAGACAGGCAGTCCTTCAGAAGATGGCATGCAGAGTGCACGCACCCAGGCA
CGCCCAAGAGAGCCCCTGGAGGATGGTGACCCAGAGGATGACAGGACGCTTGATGATGATGAGCTGGCTG
AGTACGACTTAGATAAATATGATGAGGAAGGTGACCCAGATGCTGAGACTCTTGGTGAATCTCTCTTGGG
TCTTACGGTCTACGGGAGTAATGATCAAGATCCTTACGTTACTCTGAAAGATACAGAACAATATGAACGT
GAAGATTTCTTGATTAAGCCCAGTGATAATCTTATAGTTTGTGGCCGAGCTGAACAGGACCAGTGCAATT
TAGAGGTGCATGTTTATAATCAAGAAGAAGACTCTTTTTATGTACACCATGATATACTCTTGTCTGCATA
TCCTCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGATTCTACTGGAAATTACATTGCTGTA
GGAAACATGACCCCTGTTATTGAAGTGTGGGACCTTGATATAGTGGACTCTTTAGAGCCAGTCTTCACAC
TCGGAAGTAAACTTTCAAAAAAGAAGAAAAAGAAAGGAAAGAAGAGTTCCTCAGCAGAAGGGCATACCGA
TGCTGTCCTTGACCTTTCATGGAATAAGCTAATCAGAAATGTTTTAGCAAGTGCATCAGCTGACAACACT
GTAATTCTGTGGGATATGTCCTTGGGGAAACCAGCAGCTAGCCTCGCTGTACACACAGACAAGGTCCAAA
CACTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGCTCATATGATAAGTCAGTGGCTTTGTA
TGACTGCCGAAGTCCAGATGAAAGCCATCGAATGTGGCGATTCAGTGGGCAGATAGAGAGAGTGACTTGG
AATCACTTTTCACCTTGTCATTTCTTGGCCAGTACAGATGACGGCTTTGTATATAATTTGGATGCACGTT
CAGATAAGCCAATTTTTACACTTAATGCACACAATGATGAAATCTCTGGTCTTGATCTTAGCAGTCAAAT
CAAGGGCTGTCTCGTGACTGCTTCAGCTGACAAATACGTGAAGATCTGGGACATCTTAGGAGATAGGCCA
AGTCTAGTTCATTCTAGGGACATGAAAATGGGAGTTCTCTTCTGTTCTTCATGTTGCCCTGATTTGCCAT
TTATTTATGCCTTTGGAGGTCAAAAAGAAGGGCTTCGGGTCTGGGATATAAGCACAGTCTCTTCAGTAAA
TGAAGCATTTGGAAGACGAGAGAGGCTTGTTCTTGGGAGTGCAAGAAATTCATCTATTAGTGGCCCTTTT
GGCAGCAGGAGCTCAGATACACCCATGGAGTCTTAA

Translation (501 aa):
MNRSRQVTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQEEGGGSDEEETGSPSEDGMQSARTQA
RPREPLEDGDPEDDRTLDDDELAEYDLDKYDEEGDPDAETLGESLLGLTVYGSNDQDPYVTLKDTEQYER
EDFLIKPSDNLIVCGRAEQDQCNLEVHVYNQEEDSFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIAV
GNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAVLDLSWNKLIRNVLASASADNT
VILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTW
NHFSPCHFLASTDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRP
SLVHSRDMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVSSVNEAFGRRERLVLGSARNSSISGPF
GSRSSDTPMES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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